RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 AOC1P19801 751 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GHRHRQ02643 423 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZMYND11Q15326 602 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NPY5RQ15761 445 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 XKRXQ6PP77 449 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NPAS3Q8IXF0 933 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC35F5Q8WV83 523 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ACDQ96AP0 544 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MMABQ96EY8 250 aaPredicted RBP13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FCRL3Q96P31 734 aaPredicted RBP13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 EFCAB11Q9BUY7 163 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ASPNQ9BXN1 380 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FZD3Q9NPG1 666 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TRIM36Q9NQ86 728 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PLCL2Q9UPR0 1127 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 H0YGN5 161 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SCO2O43819 266 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SSX5O60225 188 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 KAT7O95251 611 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 RAB36O95755 333 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PDYNP01213 254 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TUBG1P23258 451 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CDKL4Q5MAI5 379 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMIGD1Q6UXZ0 262 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF517Q6ZMY9 492 aaPredicted RBP13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM17Q86X19 198 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SEC14L1Q92503 715 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM41AQ96HV5 264 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 KCNH6Q9H252 994 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DPAGT1Q9H3H5 408 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ERVK-18Q9QC07 812 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DLGAP4Q9Y2H0 992 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TEX264Q9Y6I9 313 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TCRBV21S2A2A0A5A6 115 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 AQP12BA6NM10 295 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 COQ9O75208 318 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FGF18O76093 207 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ACADVLP49748 655 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GRK1Q15835 563 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BRAT1Q6PJG6 821 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 AQP12AQ8IXF9 295 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GALNT12Q8IXK2 581 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZC3H10Q96K80 434 aaKnown RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TLR9Q9NR96 1032 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 STOX2Q9P2F5 926 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PCDHB11Q9Y5F2 797 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CD97P48960 835 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 LY6G5CQ5SRR4 150 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM110Q86TL2 294 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PLCZ1Q86YW0 608 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 OR51G2Q8NGK0 314 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 OR5J2Q8NH18 312 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CCDC107Q8WV48 283 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC5A7Q9GZV3 580 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SMOC2Q9H3U7 446 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C14orf166Q9Y224 244 aaKnown RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 S100A2P29034 98 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 RPA4Q13156 261 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C18orf21Q32NC0 220 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 XKR5Q6UX68 686 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CMASQ8NFW8 434 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NUDT15Q9NV35 164 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NCDNQ9UBB6 729 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MRC1P22897 1456 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLIT3O75094 1523 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NAA10P41227 235 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GJA8P48165 433 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ENTPD1P49961 510 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C1orf61Q13536 156 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HERC3Q15034 1050 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TGFBIQ15582 683 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ASTE1Q2TB18 679 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF776Q68DI1 518 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TESCQ96BS2 214 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 KCNS2Q9ULS6 477 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 RBM47A0AV96 593 aaKnown RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CA12O43570 354 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 LEFTY1O75610 366 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 RCBTB2O95199 551 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF12P17014 697 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 RPS26P62854 115 aaKnown RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ST3GAL3Q11203 375 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GTF2IRD2BQ6EKJ0 949 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CNKSR3Q6P9H4 555 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GTF2IRD2Q86UP8 949 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SHKBP1Q8TBC3 707 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF514Q96K75 400 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BCO2Q9BYV7 579 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DERL2Q9GZP9 239 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 B4GALT6Q9UBX8 382 aa13.11□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC22A2O15244 555 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HSPA12AO43301 675 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CLEC3AO75596 197 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 KLF8O95600 359 aaPredicted RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PSMA6P60900 246 aaKnown RBP13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 VTCN1Q7Z7D3 282 aa13.1□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TXNDC5Q8NBS9 432 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms