RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 RAB39AQ14964 217 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 PCSK7Q16549 785 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 FNDC3BQ53EP0 1204 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 UBAP2Q5T6F2 1119 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 HECTD2Q5U5R9 776 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 WSCD1Q658N2 575 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ENPP7Q6UWV6 458 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 MRPL10Q7Z7H8 261 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 METTL2AQ96IZ6 378 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 PHF23Q9BUL5 403 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 MDFIC2A0A1B0GVS7 189 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 KRBA1A5PL33 1030 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 RENP00797 406 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 RAB40ALP0C0E4 278 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 EFNA1P20827 205 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 TCEA1P23193 301 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 CXorf57Q6NSI4 855 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 CUZD1Q86UP6 607 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 SERPINA12Q8IW75 414 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 IGDCC4Q8TDY8 1250 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 RAB40AQ8WXH6 277 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 RERGQ96A58 199 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 TGM7Q96PF1 710 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 IL4I1Q96RQ9 567 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 WACQ9BTA9 647 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 COA1Q9GZY4 146 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 RNF121Q9H920 327 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 SENP2Q9HC62 589 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ENAMQ9NRM1 1142 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 COMMD3Q9UBI1 195 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 EXO1Q9UQ84 846 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 PCDHB5Q9Y5E4 795 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 CNTNAP1P78357 1384 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 SONP18583 2426 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ALPK3Q96L96 1907 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 PIP5K1CO60331 668 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 SRP9P49458 86 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 FHITP49789 147 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ABHD18Q0P651 414 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 PPP1R26Q5T8A7 1209 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 TLDC1Q6P9B6 456 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 DCUN1D3Q8IWE4 304 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 SLC39A7Q92504 469 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 MASTLQ96GX5 879 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF514Q96K75 400 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 FCRL1Q96LA6 429 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM47Q9BQJ4 181 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ORAI3Q9BRQ5 295 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 PLA2G12BQ9BX93 195 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ADAM19Q9H013 955 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 SPHK1Q9NYA1 384 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ALPPL2P10696 532 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 TYMPP19971 482 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM183BQ1AE95 376 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 CNKSR3Q6P9H4 555 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 PHF13Q86YI8 300 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 OR8D2Q9GZM6 311 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 MOCS1Q9NZB8 636 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 SCML1Q9UN30 329 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 CNTN6Q9UQ52 1028 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ADAM18Q9Y3Q7 739 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 MAGI2Q86UL8 1455 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 SLC16A4O15374 487 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 NOBOXO60393 691 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 DLK1P80370 383 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 KEAP1Q14145 624 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 BRINP3Q76B58 766 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 NDUFAF7Q7L592 441 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 TPRA1Q86W33 373 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ADGRG2Q8IZP9 1017 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ZFP82Q8N141 532 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 PPCDCQ96CD2 204 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 CGRRF1Q99675 332 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ARPC5LQ9BPX5 153 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 FAM83CQ9BQN1 747 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ESRP2Q9H6T0 727 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM98Q9Y2Y6 226 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ARFGEF1Q9Y6D6 1849 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 A0A1B0GV72 72 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 CAPN14A8MX76 684 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ATP5A1P25705 553 aaKnown RBP4.7□□□□□ -1.66
CSMD3-201ENST00000297405 HSPA7P48741 367 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 MAPK14Q16539 360 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 GTF2H4Q92759 462 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF354BQ96LW1 612 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 CACNG6Q9BXT2 260 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 ABCG4Q9H172 646 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 HCN4Q9Y3Q4 1203 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 DUSP10Q9Y6W6 482 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 HBP1O60381 514 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 HCAR3P49019 387 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 TNK1Q13470 666 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 LPCAT4Q643R3 524 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 C6orf89Q6UWU4 347 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 FAM83AQ86UY5 434 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 BANPQ8N9N5 519 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 CXorf40BQ96DE9 158 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 HIST1H2AAQ96QV6 131 aa4.7□□□□□ -1.66
CSMD3-201ENST00000297405 SLC2A11Q9BYW1 496 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms