RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SNRPD2P62316 118 aaKnown RBP12.9□□□□□ -0.34
SCAF4-201ENST00000286835 ZC3H12BQ5HYM0 836 aaKnown RBP12.9□□□□□ -0.34
SCAF4-201ENST00000286835 TXNDC8Q6A555 127 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 LAIR1Q6GTX8 287 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 SERPINA13PQ6UXR4 307 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 ARMCX6Q7L4S7 300 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 GPR151Q8TDV0 419 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 FOXJ1Q92949 421 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 ART5Q96L15 291 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 NECTIN4Q96NY8 510 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 OR51B5Q9H339 312 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 DYRK1BQ9Y463 629 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 CLCA3PQ9Y6N3 262 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 HSPE1-MOB4S4R3N1 261 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 SIP14410 1827 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 TRBC2A0A5B9 178 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 CLDN24A6NM45 220 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 WWP2O00308 870 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 CASKO14936 926 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 KLKB1P03952 638 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 CNR2P34972 360 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 CRISP3P54108 245 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 CXCR4P61073 352 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 RING1Q06587 406 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 ANXA8L1Q5VT79 327 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 AGAP6Q5VW22 663 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 NCEH1Q6PIU2 408 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 RNF130Q86XS8 419 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 APCDD1Q8J025 514 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 TRIM63Q969Q1 353 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 AGAP4Q96P64 663 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 NEDD4LQ96PU5 975 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 CTRCQ99895 268 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 NIPSNAP1Q9BPW8 284 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 TMEM121BQ9BXQ6 578 aaPredicted RBP12.9□□□□□ -0.34
SCAF4-201ENST00000286835 DPP7Q9UHL4 492 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 RIMKLBQ9ULI2 386 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 SPIN1Q9Y657 262 aaPredicted RBP12.9□□□□□ -0.34
SCAF4-201ENST00000286835 KCNE2Q9Y6J6 123 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 A0A1W2PRU2 124 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 AP3D1O14617 1153 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 KLK8O60259 260 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 OAZ2O95190 189 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 CDK1P06493 297 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 RORCP51449 518 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 LEXMQ3ZCV2 418 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 C5orf22Q49AR2 442 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 RNASE12Q5GAN4 147 aaKnown RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TTC23LQ6PF05 361 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 KLHDC8BQ8IXV7 354 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TCEANCQ8N8B7 351 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 SLC28A3Q9HAS3 691 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 SMURF1Q9HCE7 757 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 KIAA1522Q9P206 1035 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 ANGPT4Q9Y264 503 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 PCDHB11Q9Y5F2 797 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 PCDHGA6Q9Y5G7 932 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TBC1D3BA6NDS4 549 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 HOXB6P17509 224 aaKnown RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TNFSF8P32971 234 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 NRIP1P48552 1158 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TGM4P49221 684 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 ARPC4P59998 168 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 AP1S1P61966 158 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 IRF5Q13568 498 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 NFE2L1Q14494 772 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 CAPN13Q6MZZ7 669 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.89□□□□□ -0.356e-6■■■□□ 19.1
SCAF4-201ENST00000286835 DNAJB7Q7Z6W7 309 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 BCL7BQ9BQE9 202 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 C1QTNF3Q9BXJ4 246 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 NLNQ9BYT8 704 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 SNX7Q9UNH6 387 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 BDKRB1P46663 353 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 RPS13P62277 151 aaKnown RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 CDK6Q00534 326 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TARDBPQ13148 414 aaKnown RBP eCLIP12.89□□□□□ -0.353e-6■□□□□ 9.1
SCAF4-201ENST00000286835 HNRNPA0Q13151 305 aaKnown RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 IL18Q14116 193 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TEAD4Q15561 434 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 ZNF284Q2VY69 593 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 FBXO43Q4G163 708 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 CRTC2Q53ET0 693 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 CLLU1OSQ5K130 101 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 ATAD3CQ5T2N8 411 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 ERAP2Q6P179 960 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TUBA3EQ6PEY2 450 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 MRPL10Q7Z7H8 261 aaKnown RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 TRAPPC5Q8IUR0 188 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 DNAJC22Q8N4W6 341 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 RAB8BQ92930 207 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 OTUB1Q96FW1 271 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 ATP6V1HQ9UI12 483 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 NDRG4Q9ULP0 352 aaKnown RBP12.89□□□□□ -0.35
SCAF4-201ENST00000286835 N6AMT1Q9Y5N5 214 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 DOCK3Q8IZD9 2030 aa12.89□□□□□ -0.35
SCAF4-201ENST00000286835 PCDH17O14917 1159 aa12.88□□□□□ -0.35
SCAF4-201ENST00000286835 CCNYL3P0C7X3 344 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms