RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 FAIM2Q9BWQ8 316 aa8.67□□□□□ -1.02
CCDC144B-201ENST00000285176 ANKRA2Q9H9E1 313 aa8.67□□□□□ -1.02
CCDC144B-201ENST00000285176 DDX28Q9NUL7 540 aaKnown RBP8.67□□□□□ -1.02
CCDC144B-201ENST00000285176 GMPPBQ9Y5P6 360 aa8.67□□□□□ -1.02
CCDC144B-201ENST00000285176 ELOVL7A1L3X0 281 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 PRAMEF26H0Y7S4 382 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SUV39H1O43463 412 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 C1GALT1C1LP0DN25 315 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 TLX1P31314 330 aaPredicted RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 RAB28P51157 221 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 PTPN5P54829 565 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 PFN3P60673 137 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 PPP1CAP62136 330 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 GAS6Q14393 721 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 NFATC4Q14934 902 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 C16orf72Q14CZ0 275 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 PHF19Q5T6S3 580 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ABRAXAS1Q6UWZ7 409 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 R3HCC1LQ7Z5L2 792 aaKnown RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ZNF605Q86T29 641 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SLC9A6Q92581 669 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ZDHHC5Q9C0B5 715 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 RAD21L1Q9H4I0 556 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 MAPRE3Q9UPY8 281 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 MED12Q93074 2177 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 IMPDH2P12268 514 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 GSTT1P30711 240 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SLC19A1P41440 591 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 LSM3P62310 102 aaKnown RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ERV3-1Q14264 604 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ALG11Q2TAA5 492 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 GPAT3Q53EU6 434 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 C1orf189Q5VU69 101 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 LSRQ86X29 649 aaPredicted RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 PROSER1Q86XN7 944 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 CDK20Q8IZL9 346 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 PARP8Q8N3A8 854 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SLC37A2Q8TED4 501 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 RSC1A1Q92681 617 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ADAP2Q9NPF8 381 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 RPS6KB2Q9UBS0 482 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ACSL5Q9ULC5 683 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 TRBV5-4A0A0C4DH59 114 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 DYTNA2CJ06 578 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 G3V2T6 193 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 IL3P08700 152 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SLC35G6P0C7Q6 338 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 CKMT2P17540 419 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 RPL3P39023 403 aaKnown RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SIM2Q14190 667 aaPredicted RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SMAD2Q15796 467 aaKnown RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 RPE65Q16518 533 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 TRIM16LQ309B1 348 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 OR52J3Q8NH60 311 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 MAL2Q969L2 176 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 CIDECQ96AQ7 238 aaPredicted RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 MIEF2Q96C03 454 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 INPP5KQ9BT40 448 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ARMC7Q9H6L4 198 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 TRPV4Q9HBA0 871 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 RHBDL2Q9NX52 303 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 A0A088AWK7 358 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 KRT75O95678 551 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SOD1P00441 154 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 LAMP1P11279 417 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 GNSP15586 552 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ZNF10P21506 573 aaPredicted RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ARRB1P49407 418 aaPredicted RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 CCR4P51679 360 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 NR1H2P55055 460 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SIM1P81133 766 aaPredicted RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 EPS8Q12929 822 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 LAPTM5Q13571 262 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 C1DQ13901 141 aaKnown RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 TMEM52BQ4KMG9 183 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 TOR1AIP1Q5JTV8 583 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 RNF220Q5VTB9 566 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 KANK2Q63ZY3 851 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ZNF551Q7Z340 670 aaPredicted RBP8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 GALNT5Q7Z7M9 940 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 CCDC116Q8IYX3 515 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 DTWD1Q8N5C7 304 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 RCBTB1Q8NDN9 531 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 ISL2Q96A47 359 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 SLC47A1Q96FL8 570 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 BMFQ96LC9 184 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 OR4K3Q96R72 315 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 EHD1Q9H4M9 534 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 EPS8L2Q9H6S3 715 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 MEAF6Q9HAF1 191 aa8.66□□□□□ -1.02
CCDC144B-201ENST00000285176 BPTFQ12830 3046 aa8.65□□□□□ -1.02
CCDC144B-201ENST00000285176 SLC5A10A0PJK1 596 aa8.65□□□□□ -1.02
CCDC144B-201ENST00000285176 PLRG1O43660 514 aaKnown RBP8.65□□□□□ -1.02
CCDC144B-201ENST00000285176 BMP10O95393 424 aa8.65□□□□□ -1.02
CCDC144B-201ENST00000285176 ETHE1O95571 254 aa8.65□□□□□ -1.02
CCDC144B-201ENST00000285176 AOC1P19801 751 aa8.65□□□□□ -1.02
CCDC144B-201ENST00000285176 KRT20P35900 424 aa8.65□□□□□ -1.02
CCDC144B-201ENST00000285176 AQP4P55087 323 aa8.65□□□□□ -1.02
CCDC144B-201ENST00000285176 DMWDQ09019 674 aa8.65□□□□□ -1.02
CCDC144B-201ENST00000285176 NCF4Q15080 339 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms