RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 THAP5Q7Z6K1 395 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 PDZD3Q86UT5 571 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 ZNF761Q86XN6 746 aaPredicted RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 PTOV1Q86YD1 416 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 GALNT13Q8IUC8 556 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 KRT78Q8N1N4 520 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 PACRGLQ8N7B6 248 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 ANKRD53Q8N9V6 530 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 C11orf65Q8NCR3 313 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 OR2T29Q8NH02 315 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 CCL4L1Q8NHW4 92 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 VANGL1Q8TAA9 524 aaPredicted RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 ZNF514Q96K75 400 aaPredicted RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 INSM2Q96T92 566 aaPredicted RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 TRIT1Q9H3H1 467 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 REEP4Q9H6H4 257 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 CAPN10Q9HC96 672 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 PHPT1Q9NRX4 125 aaPredicted RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 FAM120CQ9NX05 1096 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 C3orf18Q9UK00 162 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 FBXW2Q9UKT8 454 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 DMTF1Q9Y222 760 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 COMMD3-BMI1R4GMX3 469 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 LOC100130705A0A1B0GUX0 176 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 A0A1W2PPW3 197 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 C5orf58C9J3I9 102 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 FAM227AF5H4B4 570 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 BCKDKO14874 412 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 AP1G1O43747 822 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 NARSO43776 548 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 LCMT2O60294 686 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 TRMUO75648 421 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 TRPC1P48995 793 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 RNF144AP50876 292 aaPredicted RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 RAD23AP54725 363 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 PPP2CBP62714 309 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 PPP2CAP67775 309 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 SPIBQ01892 262 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 ROR2Q01974 943 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 PRSS53Q2L4Q9 553 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 ENPP7Q6UWV6 458 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 WDR53Q7Z5U6 358 aaPredicted RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 TRIM73Q86UV7 250 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 CYP4Z1Q86W10 505 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 NLRP8Q86W28 1048 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 ZCCHC7Q8N3Z6 543 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 CHTF18Q8WVB6 975 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 XAGE5Q8WWM1 108 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 GTPBP3Q969Y2 492 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 KCNC2Q96PR1 638 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 RBM4BQ9BQ04 359 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 AIF1LQ9BQI0 150 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 RBM4Q9BWF3 364 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 ROGDIQ9GZN7 287 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 TEX10Q9NXF1 929 aaPredicted RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 THUMPD1Q9NXG2 353 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 ZFR2Q9UPR6 939 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 EXO1Q9UQ84 846 aaKnown RBP5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 CEPT1Q9Y6K0 416 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 LTBP2Q14767 1821 aa5.79□□□□□ -1.48
TNFSF4-201ENST00000281834 MUC3AQ02505 3323 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 DOCK8Q8NF50 2099 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 PLPP1O14494 284 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 VEGFDO43915 354 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 NOL3O60936 208 aaKnown RBP5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 EIF2S1P05198 315 aaKnown RBP5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 BCHEP06276 602 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 ACADMP11310 421 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 LAMP2P13473 410 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 ACADLP28330 430 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 STT3AP46977 705 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 NUDT6P53370 316 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 PHEXP78562 749 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 HYAL1Q12794 435 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 SCARB2Q14108 478 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 RAB39AQ14964 217 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 CLCA4Q14CN2 919 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 ADRM1Q16186 407 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 DPY19L1Q2PZI1 675 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 PRR23BQ6ZRT6 265 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 APLFQ8IW19 511 aaPredicted RBP5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 NLGN4XQ8N0W4 816 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 TAGAPQ8N103 731 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 LINC01555Q8NAE3 123 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 PAPD5Q8NDF8 572 aaKnown RBP5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 HMGB4Q8WW32 186 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 RNF31Q96EP0 1072 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 SIPA1Q96FS4 1042 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 PDXPQ96GD0 296 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 CCDC115Q96NT0 180 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 C19orf43Q9BQ61 176 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 SLC17A9Q9BYT1 436 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 RHBGQ9H310 441 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 OCEL1Q9H607 264 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 FGF22Q9HCT0 170 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 KRT84Q9NSB2 600 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 ATAD3AQ9NVI7 634 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 ADPRHL2Q9NX46 363 aa5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 NDRG2Q9UN36 371 aaKnown RBP5.78□□□□□ -1.48
TNFSF4-201ENST00000281834 MAN2B2Q9Y2E5 1009 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms