RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 MS4A6EQ96DS6 147 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 ROPN1BQ9BZX4 212 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 SLC6A16Q9GZN6 736 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 EHD1Q9H4M9 534 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 PRORYQ9H606 182 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 ROPN1Q9HAT0 212 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 COPG2Q9UBF2 871 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 ZNF282Q9UDV7 671 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 MKL2Q9ULH7 1088 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 GRID1Q9ULK0 1009 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 MAN2B2Q9Y2E5 1009 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 PADI2Q9Y2J8 665 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 TIMM22Q9Y584 194 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 COL12A1Q99715 3063 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 IGHV3-20A0A0C4DH32 117 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 MYOCOSA0A1B0GUC4 107 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 LRIT2A6NDA9 550 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 PRPF4O43172 522 aaKnown RBP eCLIP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 GALR3O60755 368 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 NSA2O95478 260 aaKnown RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 CLDN9O95484 217 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 ZGLP1P0C6A0 271 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 CPA3P15088 417 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 HTR6P50406 440 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 FOXA1P55317 472 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 PWP1Q13610 501 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 HIST2H2ACQ16777 129 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 TTC19Q6DKK2 380 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 HIST2H2AA3Q6FI13 130 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 PRMT9Q6P2P2 845 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 LANCL3Q6ZV70 420 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 MILR1Q7Z6M3 343 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 MRGPREQ86SM8 312 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 SYVN1Q86TM6 617 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 EXOC3L1Q86VI1 746 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 ZC3H7AQ8IWR0 971 aaKnown RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 ANKRD42Q8N9B4 389 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 FAM47BQ8NA70 645 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 MYRIPQ8NFW9 859 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 OR2Y1Q8NGV0 311 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 OR51Q1Q8NH59 317 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 MGARPQ8TDB4 240 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 ZNF473Q8WTR7 871 aaKnown RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 BBC3Q96PG8 261 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 DPH2Q9BQC3 489 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 SARGQ9BW04 601 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 CAPS2Q9BXY5 557 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 GSTO2Q9H4Y5 243 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 TNFRSF12AQ9NP84 129 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 DMRT3Q9NQL9 472 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 C3orf18Q9UK00 162 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 PLLPQ9Y342 182 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 MAP4K5Q9Y4K4 846 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 PTGDR2Q9Y5Y4 395 aa6.86□□□□□ -1.31
DEPDC1B-201ENST00000265036 A6NL46 340 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 IDSB3KWA1 339 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 FAM227AF5H4B4 570 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 TXNDC9O14530 226 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 UBFD1O14562 309 aaKnown RBP6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 B4GALT2O60909 372 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 PRKRAO75569 313 aaKnown RBP6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 CHRNGP07510 517 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 SERPINA6P08185 405 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 NR1D1P20393 614 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 SERPINB3P29508 390 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 SSR2P43308 183 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 PRKAA2P54646 552 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 RELAQ04206 551 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 EEF1A2Q05639 463 aaKnown RBP6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 FAM53BQ14153 422 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 HERC3Q15034 1050 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 TBCCQ15814 346 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 CCDC153Q494R4 210 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 CFAP157Q5JU67 520 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 GARNL3Q5VVW2 1013 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 CLEC6AQ6EIG7 209 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 TRIM40Q6P9F5 258 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 ZNF793Q6ZN11 406 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 ABHD13Q7L211 337 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 OVCH1Q7RTY7 1134 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 NT5CQ8TCD5 201 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 TSLPQ969D9 159 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 THAP11Q96EK4 314 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 WDR34Q96EX3 536 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 FAR2Q96K12 515 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 CSF3RQ99062 836 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 MS4A8Q9BY19 250 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 GPR87Q9BY21 358 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 MRPL1Q9BYD6 325 aaKnown RBP6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 ELOVL6Q9H5J4 265 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 COPS7BQ9H9Q2 264 aaPredicted RBP6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 MID1IP1Q9NPA3 183 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 KCNK9Q9NPC2 374 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 PCDHGA6Q9Y5G7 932 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 GCN1Q92616 2671 aaKnown RBP6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 CCDC189A1A4V9 331 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 TMEM233B4DJY2 109 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 CHST10O43529 356 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 TYROBPO43914 113 aa6.85□□□□□ -1.31
DEPDC1B-201ENST00000265036 BMP10O95393 424 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms