RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 BEX1Q9HBH7 125 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 MED11Q9P086 117 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 TMED5Q9Y3A6 229 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 SLC22A1O15245 554 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 CLEC3AO75596 197 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 HNF1BP35680 557 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 PGGT1BP53609 377 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 DSG2Q14126 1118 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 TGFBIQ15582 683 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 DNM1P34Q6PK57 102 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 PAQR7Q86WK9 346 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 TMEM17Q86X19 198 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 EZH1Q92800 747 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 MOCOSQ96EN8 888 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 CD180Q99467 661 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 FBXL3Q9UKT7 428 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 DLGAP4Q9Y2H0 992 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 PCDHB14Q9Y5E9 798 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 DUOX1Q9NRD9 1551 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 ADH1BP00325 375 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 KLK3P07288 261 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 HTR1AP08908 422 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 KCNE1P15382 129 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 ATF4P18848 351 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 MLLT6P55198 1093 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 OGFRL1Q5TC84 451 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 GALNT10Q86SR1 603 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 INO80EQ8NBZ0 244 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 MMABQ96EY8 250 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 TMEM80Q96HE8 168 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 WACQ9BTA9 647 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 LAMP5Q9UJQ1 280 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 EBLN1P0CF75 366 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 S100A1P23297 94 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF792Q3KQV3 632 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 BEND4Q6ZU67 534 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 TMCO2Q7Z6W1 182 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 C12orf40Q86WS4 652 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 OR5T2Q8NGG2 359 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 NSUN5Q96P11 429 aaKnown RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 CMAHPQ9Y471 501 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 SOX1O00570 391 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 VNN2O95498 520 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 ELK4P28324 431 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 MAGEA12P43365 314 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 MAD2L1BPQ15013 274 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 PAMR1Q6UXH9 720 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 SSX6Q7RTT6 188 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 DTX3Q8N9I9 347 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 GALNT11Q8NCW6 608 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 CCDC107Q8WV48 283 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 MSLNLQ96KJ4 702 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 SIX4Q9UIU6 781 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 PTGDR2Q9Y5Y4 395 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 FEZF1A0PJY2 475 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 KAT7O95251 611 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 RAB36O95755 333 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 PDYNP01213 254 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 OR12D1P0DN82 309 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 VAMP1P23763 118 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 SCNN1AP37088 669 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 NNATQ16517 81 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 ARSJQ5FYB0 599 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 SLC36A4Q6YBV0 504 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 PLCZ1Q86YW0 608 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 TMEM130Q8N3G9 435 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 FCRL3Q96P31 734 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-201ENST00000261037 PCDHGB1Q9Y5G3 927 aa11.69□□□□□ -0.54
COL8A1-201ENST00000261037 J3QRK9 145 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 PEX12O00623 359 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 CLIC3O95833 236 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 PIK3CBP42338 1070 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 RAB30Q15771 203 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 GXYLT1Q4G148 440 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 TMEM236Q5W0B7 351 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF572Q7Z3I7 529 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SLC22A16Q86VW1 577 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 CCDC116Q8IYX3 515 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 LRRC20Q8TCA0 184 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 MR1Q95460 341 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 TESCQ96BS2 214 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 AIFM2Q9BRQ8 373 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SPEF2Q9C093 1822 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 AURKAO14965 403 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 BPNT1O95861 308 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 PIM1P11309 404 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-201ENST00000261037 GPR17Q13304 367 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 PON3Q15166 354 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SH3D19Q5HYK7 790 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SYCE2Q6PIF2 218 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 DCUN1D3Q8IWE4 304 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 C12orf76Q8N812 135 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-201ENST00000261037 LIN28AQ9H9Z2 209 aaKnown RBP11.68□□□□□ -0.54
COL8A1-201ENST00000261037 MS4A12Q9NXJ0 267 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 M0R2N6 131 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 PMM2O15305 246 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 XPNPEP2O43895 674 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 APOL3O95236 402 aa11.68□□□□□ -0.54
COL8A1-201ENST00000261037 SOD2P04179 222 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms