RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SLC45A1Q9Y2W3 748 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF451Q9Y4E5 1061 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 A0A1W2PP18 115 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 SLC22A2O15244 555 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 RNF13O43567 381 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 XPNPEP2O43895 674 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF16P17020 682 aaPredicted RBP18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 RPS26P62854 115 aaKnown RBP18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 PIGFQ07326 219 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 C18orf21Q32NC0 220 aaPredicted RBP18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 CARD17Q5XLA6 110 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 TMED4Q7Z7H5 227 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 MAPK15Q8TD08 544 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 SEC14L1Q92503 715 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 SLCO2A1Q92959 643 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 CD180Q99467 661 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 P2RY13Q9BPV8 354 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 OR51I1Q9H343 314 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 PEX12O00623 359 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 CDH11P55287 796 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 RPL6Q02878 288 aaKnown RBP18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF548Q8NEK5 533 aaPredicted RBP18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 DNAJB8Q8NHS0 232 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 METTL8Q9H825 291 aaKnown RBP18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 GRHPRQ9UBQ7 328 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 CICQ96RK0 1608 aaPredicted RBP18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 CD83Q01151 205 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 CRTC1Q6UUV9 634 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 USP53Q70EK8 1073 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 ERN2Q76MJ5 926 aaKnown RBP18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 MRGPRX2Q96LB1 330 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 SLC29A3Q9BZD2 475 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 HCN2Q9UL51 889 aa18.05■□□□□ 0.48
SMARCC1-201ENST00000254480 IGLON5A6NGN9 336 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 CSTBP04080 98 aaKnown RBP18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 JMJD7P0C870 316 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 GP1BBP13224 206 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 FECHP22830 423 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 ST3GAL3Q11203 375 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 HERC3Q15034 1050 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF572Q7Z3I7 529 aaPredicted RBP18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 SHDQ96IW2 340 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 XYLT2Q9H1B5 865 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 PSAPL1Q6NUJ1 521 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 APCDD1Q8J025 514 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 RNF186Q9NXI6 227 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 H0YGN5 161 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 OR2B6P58173 313 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF805Q5CZA5 627 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 WDTC1Q8N5D0 677 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 IRS2Q9Y4H2 1338 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 SOX2P48431 317 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 WSCD2Q2TBF2 565 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 NLGN4XQ8N0W4 816 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 PNLDC1Q8NA58 520 aaKnown RBP18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 MARCH4Q9P2E8 410 aaPredicted RBP18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 PCDHB14Q9Y5E9 798 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 MYH2Q9UKX2 1941 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 OR14I1A6ND48 311 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 ELK4P28324 431 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 GABRA3P34903 492 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 PITPNAQ00169 270 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 DEFB134Q4QY38 66 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 OR4N5Q8IXE1 308 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 NFAT5O94916 1531 aa18.04■□□□□ 0.48
SMARCC1-201ENST00000254480 RTCAO00442 366 aaKnown RBP18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 RTP2Q5QGT7 225 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 OR1A2Q9Y585 309 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 SDC3O75056 442 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 PER3P56645 1201 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 SFT2D3Q587I9 215 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 TTC9BQ8N6N2 239 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 OR8S1Q8NH09 359 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 CRELD1Q96HD1 420 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 RCBTB2O95199 551 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 ASGR2P07307 311 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF41P51814 821 aaPredicted RBP18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 SLC18A2Q05940 514 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF778Q96MU6 729 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 PTCHD1Q96NR3 888 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 FAM129BQ96TA1 746 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 PRSS51A0A1B0GVH4 220 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 IL3P08700 152 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 GSTT2BP0CG30 244 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 PON3Q15166 354 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 FLYWCH1Q4VC44 716 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.03■□□□□ 0.487e-9■■■■■ 39.4
SMARCC1-201ENST00000254480 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 ADH1BP00325 375 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 VAMP1P23763 118 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 EDNRBP24530 442 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 IER5LQ5T953 404 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 TPSD1Q9BZJ3 242 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 FBXL3Q9UKT7 428 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 PLCL2Q9UPR0 1127 aa18.03■□□□□ 0.48
SMARCC1-201ENST00000254480 HEPACAM2A8MVW5 462 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 GRPRP30550 384 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 CDKN2DP55273 166 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 S100A10P60903 97 aa18.02■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF763Q0D2J5 394 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms