RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 SPATA7Q9P0W8 599 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 FETUBQ9UGM5 382 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 GNPTGQ9UJJ9 305 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 FBXO5Q9UKT4 447 aa12.98□□□□□ -0.33
DDX39A-201ENST00000242776 ASPDHA6ND91 283 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 E9PLN8 166 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 SGK494L7N484 410 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 CDC123O75794 336 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 INHBAP08476 426 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 NUDT17P0C025 328 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 ZNF24P17028 368 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 IL1RNP18510 177 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 GP5P40197 560 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 CCNFP41002 786 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 ACTN3Q08043 901 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 UBAP2Q5T6F2 1119 aaKnown RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 ZNF468Q5VIY5 522 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 SLC25A25Q6KCM7 469 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 CD163Q86VB7 1156 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 DENND6AQ8IWF6 608 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 CHERPQ8IWX8 916 aaKnown RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 OR9A1PQ8NGU1 263 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 OR51Q1Q8NH59 317 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 HMGCLL1Q8TB92 370 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 ZCCHC10Q8TBK6 192 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 VKORC1Q9BQB6 163 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 ZNF559Q9BR84 538 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 CCDC68Q9H2F9 335 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 NPDC1Q9NQX5 325 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 LRFN1Q9P244 771 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 C19orf25Q9UFG5 118 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 CORO1CQ9ULV4 474 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 ASB1Q9Y576 335 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 NIPBLQ6KC79 2804 aaeCLIP12.97□□□□□ -0.332e-7■□□□□ 8.1
DDX39A-201ENST00000242776 A0A1B0GTH9 108 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 ARHGEF33A8MVX0 844 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 POC1B-GALNT4F8VUJ3 575 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 SYF2O95926 243 aaKnown RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 FMO4P31512 558 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 MSH2P43246 934 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 XCR1P46094 333 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 IST1P53990 364 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 EMP3P54852 163 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 MPP1Q00013 466 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 MYBPHQ13203 477 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 CTBP1Q13363 440 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 EFTUD2Q15029 972 aaKnown RBP eCLIP12.97□□□□□ -0.338e-7■■■■□ 26.6
DDX39A-201ENST00000242776 NDUFA9Q16795 377 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 SFT2D3Q587I9 215 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 CTSL3PQ5NE16 218 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 GRTP1Q5TC63 336 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 GARNL3Q5VVW2 1013 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 ICE2Q659A1 982 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 H3F3CQ6NXT2 135 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 PAPD4Q6PIY7 484 aaKnown RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 STRA8Q7Z7C7 330 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 KIF2BQ8N4N8 673 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 MARVELD2Q8N4S9 558 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 ARHGEF39Q8N4T4 335 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 MAGEC3Q8TD91 643 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 PHF10Q8WUB8 498 aaKnown RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 SMPDL3AQ92484 453 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 PAFAH2Q99487 392 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 PKP4Q99569 1192 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 P2RY12Q9H244 342 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 GSX1Q9H4S2 264 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 FBXO6Q9NRD1 293 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-201ENST00000242776 SMYD2Q9NRG4 433 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 GALPQ9UBC7 116 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 COMMD10Q9Y6G5 202 aa12.97□□□□□ -0.33
DDX39A-201ENST00000242776 AKAP6Q13023 2319 aa12.96□□□□□ -0.33
DDX39A-201ENST00000242776 ZNF469Q96JG9 3925 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-201ENST00000242776 CXorf49A8MYA2 514 aaPredicted RBP12.96□□□□□ -0.34
DDX39A-201ENST00000242776 H3BMM5 538 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 NEURL1O76050 574 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 PDE9AO76083 593 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 C1QAP02745 245 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 RPS3P23396 243 aaKnown RBP eCLIP12.96□□□□□ -0.34
DDX39A-201ENST00000242776 DNAJA1P31689 397 aaKnown RBP12.96□□□□□ -0.34
DDX39A-201ENST00000242776 SPRP35270 261 aaPredicted RBP12.96□□□□□ -0.34
DDX39A-201ENST00000242776 SERPINB9P50453 376 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 ADARP55265 1226 aaKnown RBP12.96□□□□□ -0.34
DDX39A-201ENST00000242776 NAA25Q14CX7 972 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 THEMIS2Q5TEJ8 643 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 CROCCP2Q86T23 111 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 CCDC71Q8IV32 467 aaPredicted RBP12.96□□□□□ -0.34
DDX39A-201ENST00000242776 RPRMLQ8N4K4 120 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 SLC44A1Q8WWI5 657 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 TSLPQ969D9 159 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 CCDC138Q96M89 665 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 TMUB1Q9BVT8 246 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 PSMC3IPQ9P2W1 217 aaPredicted RBP12.96□□□□□ -0.34
DDX39A-201ENST00000242776 HRH3Q9Y5N1 445 aa12.96□□□□□ -0.34
DDX39A-201ENST00000242776 ACANP16112 2415 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 ZNF860A6NHJ4 632 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 H7BY64 318 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 DYNC1I1O14576 645 aa12.95□□□□□ -0.34
DDX39A-201ENST00000242776 TFECO14948 347 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-201ENST00000242776 SLC25A12O75746 678 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms