RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 UBE2R2Q712K3 238 aaPredicted RBP9.06□□□□□ -0.96
HLA-DOA-201ENST00000229829 NXPE1Q8N323 547 aa9.06□□□□□ -0.96
HLA-DOA-201ENST00000229829 PANX1Q96RD7 426 aa9.06□□□□□ -0.96
HLA-DOA-201ENST00000229829 MMP27Q9H306 513 aa9.06□□□□□ -0.96
HLA-DOA-201ENST00000229829 FBXL12Q9NXK8 326 aa9.06□□□□□ -0.96
HLA-DOA-201ENST00000229829 RNF6Q9Y252 685 aa9.06□□□□□ -0.96
HLA-DOA-201ENST00000229829 SAMHD1Q9Y3Z3 626 aaKnown RBP9.06□□□□□ -0.96
HLA-DOA-201ENST00000229829 MTX2O75431 263 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 WBP4O75554 376 aaKnown RBP9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 CCNDBP1O95273 360 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 VIPP01282 170 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 COL6A1P12109 1028 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 JUNDP17535 347 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 SOX6P35712 828 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 LIPAP38571 399 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 HNF4AP41235 474 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 VEGFBP49765 207 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 CDH18Q13634 790 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 NFE2L1Q14494 772 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 MAD2L1BPQ15013 274 aaPredicted RBP9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 ACOX1Q15067 660 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 MED22Q15528 200 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 RFX4Q33E94 735 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 ATP13A5Q4VNC0 1218 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 PRSS36Q5K4E3 855 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 SYT6Q5T7P8 510 aaPredicted RBP9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 MACC1Q6ZN28 852 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 GLRX5Q86SX6 157 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 PTOV1Q86YD1 416 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 ZNF557Q8N988 423 aaPredicted RBP9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 SIMC1Q8NDZ2 872 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 UBTD2Q8WUN7 234 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 TPD52L3Q96J77 140 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 SLA2Q9H6Q3 261 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 TMEM184CQ9NVA4 438 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 ATP6V1HQ9UI12 483 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 SCN8AQ9UQD0 1980 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 KCNE1BA0A087WTH5 132 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 SNX4O95219 450 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 CYP2A6P11509 494 aaPredicted RBP9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 KDELR2P33947 212 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 CTSKP43235 329 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 FCGRTP55899 365 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 CYP4F8P98187 520 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 SMARCB1Q12824 385 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 POU4F3Q15319 338 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 UGT8Q16880 541 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 ADNP2Q6IQ32 1131 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 ZZZ3Q8IYH5 903 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 YIPF7Q8N8F6 280 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 UTP15Q8TED0 518 aaKnown RBP9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 MAL2Q969L2 176 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 HSH2DQ96JZ2 352 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 P2RY13Q9BPV8 354 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 HTATIP2Q9BUP3 242 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 VN1R3Q9BXE9 311 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 RDH14Q9HBH5 336 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 CD84Q9UIB8 345 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 NDRG4Q9ULP0 352 aaKnown RBP9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 SAMD4AQ9UPU9 718 aaKnown RBP9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 ANAPC1Q9H1A4 1944 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 USP34Q70CQ2 3546 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 MYOFQ9NZM1 2061 aa9.05□□□□□ -0.96
HLA-DOA-201ENST00000229829 M0R129 80 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 ARHGAP33O14559 1287 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 FPGTO14772 594 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 ZNF821O75541 412 aaPredicted RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 B3GALNT1O75752 331 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 FABP3P05413 133 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 IL32P24001 234 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 KIR3DL1P43629 444 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 CRYBA2P53672 197 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 WNT3P56703 355 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 ABATP80404 500 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SNTA1Q13424 505 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 DDX39BQ13838 428 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 VMACQ2NL98 169 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 DGKKQ5KSL6 1271 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SLX4IPQ5VYV7 408 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 NOXRED1Q6NXP6 359 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SERPINA13PQ6UXR4 307 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 NLRP8Q86W28 1048 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 UBQLNLQ8IYU4 475 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 STX19Q8N4C7 294 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 PCSK9Q8NBP7 692 aaKnown RBP9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SETD9Q8NE22 299 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 ADAMTS19Q8TE59 1207 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 APH1BQ8WW43 257 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 DNASE1L2Q92874 299 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 RETREG1Q9H6L5 497 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 TM9SF3Q9HD45 589 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 BRD7Q9NPI1 651 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 KRT84Q9NSB2 600 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 TMPRSS11EQ9UL52 423 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 GON4LQ3T8J9 2241 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 TEX46H3BTG2 121 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 H7C4K7 107 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 SCN2BO60939 215 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 AMD1P17707 334 aa9.04□□□□□ -0.96
HLA-DOA-201ENST00000229829 IL1RNP18510 177 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms