RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 KIAA1549LQ6ZVL6 1849 aa21.08■□□□□ 0.96
SMARCD2-201ENST00000225742 CLDN25C9JDP6 229 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 M0R3G1 203 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 WBP4O75554 376 aaKnown RBP21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 ACADLP28330 430 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 KRT20P35900 424 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 GGT2P36268 569 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 MASP1P48740 699 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 PRIM2P49643 509 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 UBE3AQ05086 875 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 CRB2Q5IJ48 1285 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 RAET1GQ6H3X3 334 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 TSEN54Q7Z6J9 526 aaKnown RBP21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 NATD1Q8N6N6 113 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 OR4C15Q8NGM1 316 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 POF1BQ8WVV4 589 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 ARRDC3Q96B67 414 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 SH3YL1Q96HL8 342 aaPredicted RBP21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 SAMD11Q96NU1 681 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 C1GALT1Q9NS00 363 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 GPATCH2Q9NW75 528 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 AHSPQ9NZD4 102 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 RAPGEFL1Q9UHV5 662 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 ERGIC3Q9Y282 383 aa21.07■□□□□ 0.96
SMARCD2-201ENST00000225742 MAGEB3O15480 346 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 POP7O75817 140 aaKnown RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 ETFAP13804 333 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 CEBPBP17676 345 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 CTNNB1P35222 781 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 MLLT10P55197 1068 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 EEF1A2Q05639 463 aaKnown RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 RPA4Q13156 261 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 UBE2UQ5VVX9 321 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 DCDC5Q6ZRR9 648 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 TRMT11Q7Z4G4 463 aaKnown RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 GRASPQ7Z6J2 395 aaPredicted RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 CCDC71Q8IV32 467 aaPredicted RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 ENTHD1Q8IYW4 607 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 KRT78Q8N1N4 520 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 ZNF366Q8N895 744 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 OR4K1Q8NGD4 311 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 WDR48Q8TAF3 677 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 SPPL3Q8TCT6 385 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 ZNF300Q96RE9 604 aaPredicted RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 PSD2Q9BQI7 771 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 SH2B3Q9UQQ2 575 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 PCDHGA6Q9Y5G7 932 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 HCFC2Q9Y5Z7 792 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 LRRK1Q38SD2 2015 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 NUP210Q8TEM1 1887 aaPredicted RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 LZTS3O60299 673 aaPredicted RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 TGFB1P01137 390 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 DDX5P17844 614 aaKnown RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 KELP23276 732 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 AQP1P29972 269 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 PPIGQ13427 754 aaKnown RBP eCLIP21.06■□□□□ 0.962e-7■■■■□ 20.6
SMARCD2-201ENST00000225742 HNRNPA1L2Q32P51 320 aaKnown RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 COX20Q5RI15 118 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 C9orf64Q5T6V5 341 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 ANGPTL8Q6UXH0 198 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 OR10G2Q8NGC3 310 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 APH1BQ8WW43 257 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 GEMIN6Q8WXD5 167 aaKnown RBP21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 MYDGFQ969H8 173 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 OR51B5Q9H339 312 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 ANKHQ9HCJ1 492 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 SPASTQ9UBP0 616 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 ENOPH1Q9UHY7 261 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 ICKQ9UPZ9 632 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 ANGPT4Q9Y264 503 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 COQ6Q9Y2Z9 468 aa21.06■□□□□ 0.96
SMARCD2-201ENST00000225742 OR2A25A4D2G3 310 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 CLDN24A6NM45 220 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 PCDHGA12O60330 932 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 TBX19O60806 448 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 SULT1C4O75897 302 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 KLHL18O94889 574 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 C6P13671 934 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 PSMB9P28065 219 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 EPHA2P29317 976 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 TAS2R50P59544 299 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 CDK6Q00534 326 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 TSTA3Q13630 321 aaPredicted RBP21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 MICAQ29983 383 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 RGS21Q2M5E4 152 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 TBC1D25Q3MII6 688 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 PRAMEF14Q5SWL7 426 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 PRAMEF13Q5VWM6 474 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 SLCO6A1Q86UG4 719 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 P3H2Q8IVL5 708 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 DEPDC4Q8N2C3 294 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 RAD51AP1Q96B01 352 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 TAMM41Q96BW9 452 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 RAD9AQ99638 391 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 ZDHHC5Q9C0B5 715 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 RNF6Q9Y252 685 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 DGKBQ9Y6T7 804 aa21.05■□□□□ 0.96
SMARCD2-201ENST00000225742 A0A1W2PRB8 838 aa21.04■□□□□ 0.96
SMARCD2-201ENST00000225742 FGBP02675 491 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms