RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ZNF778Q96MU6 729 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 TRIM3O75382 744 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 S1PR4O95977 384 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 CKMT2P17540 419 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 XRCC1P18887 633 aaPredicted RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 CLDN2P57739 230 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 PPP1R3AQ16821 1122 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 DEFB133Q30KQ1 61 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 KLHL22Q53GT1 634 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 ADGRD2Q7Z7M1 963 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 SYVN1Q86TM6 617 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 ZNF487B1APH4 448 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 CD9P21926 228 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 MAP3K8P41279 467 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 LEPRP48357 1165 aaKnown RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 HSF2Q03933 536 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 MRPL43Q8N983 215 aaKnown RBP17.8■□□□□ 0.44
CLIP2-201ENST00000223398 HSH2DQ96JZ2 352 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 B3GNT4Q9C0J1 378 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 FANCFQ9NPI8 374 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 MALT1Q9UDY8 824 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 PCDHGB7Q9Y5F8 929 aa17.8■□□□□ 0.44
CLIP2-201ENST00000223398 SDK1Q7Z5N4 2213 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 E7ENX8 843 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 GSK3BP49841 420 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 CDKN2DP55273 166 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 IDNKQ5T6J7 187 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 CEP97Q8IW35 865 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 R3HDMLQ9H3Y0 253 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 REEP4Q9H6H4 257 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 HEBP1Q9NRV9 189 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 TLR4O00206 839 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 EMX2Q04743 252 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 S100ZQ8WXG8 99 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 HSPBAP1Q96EW2 488 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 CPEB1Q9BZB8 566 aaKnown RBP17.79■□□□□ 0.44
CLIP2-201ENST00000223398 DIABLOQ9NR28 239 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 OARD1Q9Y530 152 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 HCFC2Q9Y5Z7 792 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 TGFBR2P37173 567 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 CSTF1Q05048 431 aaKnown RBP17.79■□□□□ 0.44
CLIP2-201ENST00000223398 ST3GAL3Q11203 375 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 UBQLNLQ8IYU4 475 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 POLR2J2Q9GZM3 115 aaKnown RBP17.79■□□□□ 0.44
CLIP2-201ENST00000223398 HMGN1P05114 100 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 DRD1P21728 446 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 RABIFP47224 123 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 DIO3P55073 304 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 MTTPP55157 894 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 OR12D2P58182 307 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 MLLT1Q03111 559 aaPredicted RBP17.79■□□□□ 0.44
CLIP2-201ENST00000223398 LAPTM4AQ15012 233 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 C5orf22Q49AR2 442 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 CATSPEREQ5SY80 951 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 NLGN4XQ8N0W4 816 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 KRTCAP2Q8N6L1 136 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 LGR4Q9BXB1 951 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 PLCL2Q9UPR0 1127 aa17.79■□□□□ 0.44
CLIP2-201ENST00000223398 HIDE1A8MVS5 230 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 MPC1LP0DKB6 136 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 DNAJA1P31689 397 aaKnown RBP17.78■□□□□ 0.44
CLIP2-201ENST00000223398 KCNC1P48547 511 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 RPS15P62841 145 aaKnown RBP17.78■□□□□ 0.44
CLIP2-201ENST00000223398 YIPF7Q8N8F6 280 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 ZNF689Q96CS4 500 aaPredicted RBP17.78■□□□□ 0.44
CLIP2-201ENST00000223398 C11orf98E9PRG8 122 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 OR12D1P0DN82 309 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 IFI30P13284 250 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 PFKLP17858 780 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 IL1RNP18510 177 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 OR1E2P47887 323 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 GBX2P52951 348 aaPredicted RBP17.78■□□□□ 0.44
CLIP2-201ENST00000223398 LRRC26Q2I0M4 334 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 OGFOD2Q6N063 350 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 EPGNQ6UW88 154 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 UHRF1Q96T88 793 aaPredicted RBP17.78■□□□□ 0.44
CLIP2-201ENST00000223398 CLSTN3Q9BQT9 956 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 SLC46A2Q9BY10 475 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 POPDC3Q9HBV1 291 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 ZFR2Q9UPR6 939 aaKnown RBP17.78■□□□□ 0.44
CLIP2-201ENST00000223398 WRBO00258 174 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 RNF13O43567 381 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 HNRNPA2B1P22626 353 aaKnown RBP17.78■□□□□ 0.44
CLIP2-201ENST00000223398 PLCXD2Q0VAA5 305 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 TRIM73Q86UV7 250 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 P2RY8Q86VZ1 359 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 CCDC54Q8NEL0 328 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 PEX11GQ96HA9 241 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 TTTY10Q9BZA0 68 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 GDE1Q9NZC3 331 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 SATB2Q9UPW6 733 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 RPL36Q9Y3U8 105 aaKnown RBP17.78■□□□□ 0.44
CLIP2-201ENST00000223398 VSTM5A8MXK1 200 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 SMAD6O43541 496 aaKnown RBP17.78■□□□□ 0.44
CLIP2-201ENST00000223398 SCAPQ12770 1279 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 PTGR1Q14914 329 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 FAM69BQ5VUD6 431 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 LIPJQ5W064 366 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 PLXDC1Q8IUK5 500 aa17.78■□□□□ 0.44
CLIP2-201ENST00000223398 AQP11Q8NBQ7 271 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms