RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SEMA4FO95754 770 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 S100A9P06702 114 aaKnown RBP18.29■□□□□ 0.52
SMPD3-201ENST00000219334 RNH1P13489 461 aaKnown RBP18.29■□□□□ 0.52
SMPD3-201ENST00000219334 DCAF12L1Q5VU92 463 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 ARL9Q6T311 187 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 ASB9Q96DX5 294 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 OR52B2Q96RD2 323 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 NLGN3Q9NZ94 848 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 SLCO3A1Q9UIG8 710 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 CD207Q9UJ71 328 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 WASF3Q9UPY6 502 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 PCDHB14Q9Y5E9 798 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 RAB36O95755 333 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 SLC6A4P31645 630 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 KCNC1P48547 511 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 RORCP51449 518 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 ZNF542PQ5EBM4 170 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.29■□□□□ 0.52
SMPD3-201ENST00000219334 ZNF548Q8NEK5 533 aaPredicted RBP18.29■□□□□ 0.52
SMPD3-201ENST00000219334 PEX13Q92968 403 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 NXPE2Q96DL1 559 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 ROBO1Q9Y6N7 1651 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 APOC1P02654 83 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 EDNRBP24530 442 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 ACSBG2Q5FVE4 666 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 TPRG1LQ5T0D9 272 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 ZC3H14Q6PJT7 736 aaKnown RBP18.29■□□□□ 0.52
SMPD3-201ENST00000219334 RNF130Q86XS8 419 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 IMP4Q96G21 291 aaKnown RBP18.29■□□□□ 0.52
SMPD3-201ENST00000219334 NELL2Q99435 816 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 HCKP08631 526 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 SLC35G1Q2M3R5 365 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 REEP3Q6NUK4 255 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 TSSK6Q9BXA6 273 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 METTL21EPA6NDL7 271 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 NPIPA2E9PIF3 369 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 NPIPA3F8WFD2 350 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 ACRV1P26436 265 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 FOXN2P32314 431 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 CTBP2P56545 445 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 TIGD6Q17RP2 521 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 RBM48Q5RL73 367 aaKnown RBP18.29■□□□□ 0.52
SMPD3-201ENST00000219334 FAM182AQ5T1J6 154 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 CCDC116Q8IYX3 515 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 TRIM36Q9NQ86 728 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 IFT52Q9Y366 437 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 INMTO95050 263 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 CH25HO95992 272 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 RAB28P51157 221 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 CLRN1P58418 232 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 PLCXD2Q0VAA5 305 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 GXYLT1Q4G148 440 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 KIAA0319Q5VV43 1072 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 RNF111Q6ZNA4 994 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 USP43Q70EL4 1123 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 CSNK1A1LQ8N752 337 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 SORCS1Q8WY21 1168 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 LRCH3Q96II8 777 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 WDR77Q9BQA1 342 aaPredicted RBP18.28■□□□□ 0.52
SMPD3-201ENST00000219334 TAS2R1Q9NYW7 299 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 MATN2O00339 956 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 ARL6IP5O75915 188 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 PMS2P3Q13401 168 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 DEFB134Q4QY38 66 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 KCTD7Q96MP8 289 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 MCHR1Q99705 422 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 XYLT2Q9H1B5 865 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 A0A1W2PP18 115 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 H0YJX3 145 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 JUPP14923 745 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 WDR4P57081 412 aaKnown RBP18.28■□□□□ 0.52
SMPD3-201ENST00000219334 FOXK1P85037 733 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 ZNF648Q5T619 568 aaPredicted RBP18.28■□□□□ 0.52
SMPD3-201ENST00000219334 OR5L2Q8NGL0 311 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMPD3-201ENST00000219334 TSACCQ96A04 125 aaPredicted RBP18.28■□□□□ 0.52
SMPD3-201ENST00000219334 SCGB3A2Q96PL1 93 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 ALPK1Q96QP1 1244 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 PPP4R1LQ9P1A2 415 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 TEX13CA0A0J9YWL9 993 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 CIB4A0PJX0 185 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 OAZ2O95190 189 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 C6P13671 934 aa18.28■□□□□ 0.52
SMPD3-201ENST00000219334 HSPA12AO43301 675 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 GSK3BP49841 420 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 TRAM2Q15035 370 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 KHDC1Q4VXA5 237 aaKnown RBP18.27■□□□□ 0.52
SMPD3-201ENST00000219334 LRIF1Q5T3J3 769 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 TMPPEQ6ZT21 453 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 AQP11Q8NBQ7 271 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 CD320Q9NPF0 282 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 HTR3EA5X5Y0 456 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 UQCRC2P22695 453 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 GABRA3P34903 492 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 TMCO6Q96DC7 493 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 PYURFQ96I23 114 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 DPH7Q9BTV6 452 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 ABLIM1O14639 778 aa18.27■□□□□ 0.52
SMPD3-201ENST00000219334 SCO2O43819 266 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms