RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 MthfsdQ3URQ7 372 aaKnown RBP9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ermp1Q3UVK0 898 aaKnown RBP9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tusc1Q673H1 205 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Zswim9Q6DI92 447 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Coq4Q8BGB8 266 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 NapepldQ8BH82 396 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rbm45Q8BHN5 476 aaKnown RBP9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nrip1Q8CBD1 1161 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fam155aQ8CCS2 467 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pih1d2Q8CHR9 315 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ift80Q8K057 777 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr53Q8VGL8 312 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 MlycdQ99J39 492 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 BniplQ99JU7 328 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rpl4Q9D8E6 419 aaKnown RBP9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Osbpl3Q9DBS9 855 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tnfrsf21Q9EPU5 655 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ubqln2Q9QZM0 638 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Glipr1l3A0A1W2P7V2 236 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm5072A2AHM1 344 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 H60cB1B213 197 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 9330159F19RikD3Z623 648 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm10608E9PZ13 166 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm11239E9Q5Z9 360 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm11237F2Z3W5 360 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm11238F2Z478 360 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sult3a1O35403 293 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Matn3O35701 481 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cyp4a14O35728 507 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ClppO88696 272 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Htr1bP28334 386 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Chrm4P32211 479 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 TstP52196 297 aaKnown RBP9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Isl1P61372 349 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 InipQ3TXT3 104 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hhla1Q3TYV2 514 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm428Q3UTE2 360 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Slc25a51Q5HZI9 298 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm11487Q5RIS0 354 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Itga7Q61738 1179 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cep78Q6IRU7 790 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ScocQ78YZ6 125 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gpr62Q80UC6 358 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmem202Q80W35 275 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ppp1r15bQ8BFW3 697 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 GskipQ8BGR8 139 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Znf410Q8BKX7 478 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Kyat1Q8BTY1 424 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Lcmt2Q8BYR1 686 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rnf130Q8VEM1 419 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr1461Q8VEV7 312 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mrps18bQ99N84 254 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Itgb3bpQ9CQ82 176 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nudt14Q9D142 222 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr701Q9D3U9 316 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Dkk3Q9QUN9 349 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fkbp9Q9Z247 570 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Zfp969A2ART2 485 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm4775F7ANJ3 135 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rhox2hK7N6P1 191 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Dcpp3L7N259 170 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Psmc3ipO35047 217 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 MbP04247 154 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pmp22P16646 161 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hoxc11P31313 304 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Emp1P47801 160 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Dpf3P58269 378 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hoxd13P70217 339 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rplp2P99027 115 aaKnown RBP9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr1308Q7TQX0 320 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr26Q7TRB7 308 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ccdc126Q8BIS8 140 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Trnt1Q8K1J6 434 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hspa14Q99M31 509 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tex47Q9D5W8 253 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr933Q9EQA0 308 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tor1aQ9ER39 333 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Prmt1Q9JIF0 371 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rgs20Q9QZB1 239 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Zfp236S4R299 1847 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Cldn34b1B1AZQ8 209 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn2r85G3UW56 850 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fmo6J3QMN6 532 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Mapk12O08911 367 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tacr2P30549 384 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 FhP97807 507 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 CdonQ32MD9 1250 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Slc37a3Q3TIT8 494 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pin1rt1Q3ULQ2 159 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nr2f1Q60632 422 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 RimklaQ6PFX8 380 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ppp2r2bQ6ZWR4 443 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ldoc1Q7TPY9 151 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr503Q7TRU8 323 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr320Q7TRZ4 306 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sra1Q80VJ2 232 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fam205cQ80YD3 371 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Trim50Q810I2 483 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Slc7a6Q8BGK6 515 aa9.38□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Kctd11Q8K485 232 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms