RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Skint10A7TZG1 354 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zbtb10E9Q8X5 861 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cyp21P03940 487 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 UbdP63072 162 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 NogP97466 232 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr1385Q7TQT1 309 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr1046Q7TR79 316 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 MafaQ8CF90 359 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mrps5Q99N87 432 aaKnown RBP11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adgrf4Q9D2L6 698 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rrp8Q9DB85 457 aaKnown RBP11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Dusp13Q9QYJ7 198 aa11.6□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sec14l5B2RXM5 696 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn1r184E9Q2N4 314 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm10271F6WY25 52 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pbx1P41778 430 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Lrig1P70193 1091 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ffar3Q3UFD7 319 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Scarf1Q5ND28 820 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Has1Q61647 583 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Prmt6Q6NZB1 378 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr1475Q8VEV6 314 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sppl3Q9CUS9 384 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Plekhj1Q9D240 164 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rpl4Q9D8E6 419 aaKnown RBP11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Q9DAY5 185 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mbd4Q9Z2D7 554 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn2r11E9Q4X4 861 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 MaxP28574 160 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mthfd1lQ3V3R1 977 aaKnown RBP11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ddx4Q61496 702 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Trim24Q64127 1051 aaKnown RBP11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pi4k2bQ8CBQ5 469 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Scpep1Q920A5 452 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 AadacQ99PG0 398 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Uqcrc2Q9DB77 453 aaKnown RBP11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Arrdc4A0A0B4J1F4 415 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr560A0A1B0GSU5 314 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Actl10A2AKE7 346 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Phf11cB4XVP9 339 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 BckdkO55028 412 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rbm15Q0VBL3 962 aaKnown RBP11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Arhgap1Q5FWK3 439 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ift172Q6VH22 1749 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fam181bQ80VF6 417 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Uts2rQ8VIH9 385 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Acy3Q91XE4 318 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nudt17Q9CWD3 296 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slc22a4Q9Z306 553 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 PpibP24369 216 aaKnown RBP11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rpl6P47911 296 aaKnown RBP11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ntan1Q64311 310 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Znf182Q6P560 627 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Eri3Q8C460 337 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Scara5Q8K299 491 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr382Q8VF79 312 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr570Q8VH12 312 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sdcbp2Q99JZ0 292 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gstt3Q99L20 241 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gnpda2Q9CRC9 276 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 CroccQ8CJ40 2009 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 GabreA2AMW3 916 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn2r85G3UW56 850 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slc32a1O35633 525 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Defa11P50709 85 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rps3P62908 243 aaKnown RBP11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cxcr4P70658 359 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Eci3Q78JN3 317 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ofcc1Q8BGX4 166 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Coro2bQ8BH44 480 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Lrrc19Q8BZT5 364 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rnf144aQ925F3 292 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gid4Q9CPY6 217 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slamf9Q9D780 285 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tubgcp6G5E8P0 1769 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cldn5O54942 218 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ptpn22P29352 802 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mier2Q3U3N0 541 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tas2r110Q7M712 333 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn1r217Q8R270 298 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 MypopQ8R4U1 393 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mtfr2Q8VED8 361 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr1019Q8VGS3 310 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pot1Q91WC1 640 aaKnown RBP11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 FtmtQ9D5H4 237 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 NckipsdQ9ESJ4 714 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm3854A0A1B0GSS6 495 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Npy1rQ04573 382 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp874aQ8BX23 447 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slc36a1Q8K4D3 475 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn1r228Q8R2A7 333 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 PyurfQ9D1C3 112 aa11.59□□□□□ -0.55
Trim56-201ENSMUST00000054384 F9P16294 471 aa11.58□□□□□ -0.55
Trim56-201ENSMUST00000054384 FhP97807 507 aa11.58□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tlx2Q61663 284 aa11.58□□□□□ -0.55
Trim56-201ENSMUST00000054384 Doxl2Q6IMK7 723 aa11.58□□□□□ -0.55
Trim56-201ENSMUST00000054384 Eif5a2Q8BGY2 153 aaKnown RBP11.58□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ugt2a3Q8BWQ1 534 aa11.58□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ptges3lQ9D9A7 131 aa11.58□□□□□ -0.55
Trim56-201ENSMUST00000054384 Dio2Q9Z1Y9 266 aa11.58□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 65.7 ms