RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Rcbtb1Q6NXM2 531 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Clec18aQ7TSQ1 534 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Atl1Q8BH66 558 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 TpbglQ8C013 384 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 MINDY3Q9CV28 444 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Tm9sf3Q9ET30 587 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 NelfeP19426 375 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Il11ra2P70225 432 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Hif3aQ0VBL6 662 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Ppp1r14bQ62084 147 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Adamtsl2Q7TSK7 957 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Mtrf1lQ8BJU9 373 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Fbxl8Q8CIG9 374 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Slc47a1Q8K0H1 567 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 MvdQ99JF5 401 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 C1qtnf2Q9D8U4 294 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Ebna1bp2Q9D903 306 aaKnown RBP21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rsph9Q9D9V4 276 aa21.94■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Col27a1Q5QNQ9 1845 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Gm29797A0A140LIA7 188 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rnf165E9QAU8 347 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Gm10477F6SW83 55 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Angpt1O08538 498 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Srsf5O35326 269 aaKnown RBP21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Bnc1O35914 961 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Gnpda1O88958 289 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 GsnP13020 780 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 P18533 117 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Hnf4aP49698 474 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Emx2Q04744 253 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 GiprQ0P543 460 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 CrtamQ149L7 389 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Muc19Q6JHY2 733 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Creg2Q8BGC9 288 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Slc35e2Q8C811 405 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Zfpm2Q8CCH7 1151 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Slc45a3Q8K0H7 553 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 HnrnprQ8VHM5 632 aaKnown RBP21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Mrm1Q99J25 320 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 DhddsQ99KU1 333 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Itfg1Q99KW9 610 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Mdm1Q9D067 708 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Fam162aQ9D6U8 155 aa21.93■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Gbp6A0A0G2JDV3 611 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Prrt4B2RU40 902 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Izumo4D3Z690 227 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Kbtbd6E9PYD7 486 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Kbtbd7G5E8C2 690 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Nrp2O35375 931 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Zw10O54692 779 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Lgals7O54974 136 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Dlx2P40764 332 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rack1P68040 317 aaKnown RBP21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 ptchd1Q14B62 888 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 MybphlQ5FW53 355 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Jak3Q62137 1100 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 CebpeQ6PZD9 281 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Pcdh8Q7TSK3 1070 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rdh12Q8BYK4 316 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Zhx3Q8C0Q2 951 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Retreg1dQ8VE91 480 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 HnrnpabQ99020 285 aaKnown RBP21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Lyrm1Q9CQB7 122 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 MecrQ9DCS3 373 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 IsxA1A546 240 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Fam217bA2AJW5 387 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Olfr1200A2ATJ4 336 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Vmn2r114E9Q281 856 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Znf143O70230 638 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Tyrp1P07147 537 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Pdcd5P56812 126 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Padi2Q08642 673 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Tmem38aQ3TMP8 298 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Actr3bQ641P0 418 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Pfkfb4Q6DTY7 469 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 AptxQ7TQC5 342 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 ChfrQ810L3 664 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Q8BP99 230 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rab43Q8CG50 210 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Grhl2Q8K5C0 625 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Rbmx2Q8R0F5 326 aaKnown RBP21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Ptgr1Q91YR9 329 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Ndufaf4Q9D1H6 173 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Cdrt4Q9DA64 179 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Slc13a2Q9ES88 586 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Smok1Q9QYZ4 484 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 St6galnac1Q9QZ39 526 aa21.92■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Zscan4eA0A1B0GRE8 505 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 SrsxB2RZI1 361 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Ephb6O08644 1014 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 EllO08856 602 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Socs2O35717 198 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 AurkcO88445 282 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 F2rl3O88634 396 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Dnajb5O89114 348 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Myf6P15375 242 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Msr1P30204 458 aaKnown RBP21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Kcnj13P86046 360 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 OxtrP97926 388 aa21.91■■□□□ 1.1
Upf3a-201ENSMUST00000043767 Tmed1Q3V009 227 aa21.91■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms