RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Ccr3P51678 359 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Adamts15P59384 950 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Q3U7U4 132 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cpxcr1Q3V0P1 322 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Lcmt2Q8BYR1 686 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Agbl3Q8CDP0 1006 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Efcab7Q8VDY4 628 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tysnd1Q9DBA6 568 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Arfgef1G3X9K3 1846 aaKnown RBP9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rasgef1aA0A0N4SVR5 498 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1306A2BFL7 312 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Wdr76A6PWY4 622 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm8871F7AXK2 190 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tnfsf9P41274 309 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 AbatP61922 500 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 MlipQ5FW52 269 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 SynaQ5G5D5 617 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Taar7fQ5QD08 358 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Taar7eQ5QD09 358 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Taar7bQ5QD11 358 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pabpc2Q62029 628 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vat1Q62465 406 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 ParpbpQ6IRT3 573 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fbxl19Q6PB97 674 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 GnsQ8BFR4 544 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cadm2Q8BLQ9 435 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gen1Q8BMI4 908 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Eri3Q8C460 337 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 EndovQ8C9A2 338 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Trnt1Q8K1J6 434 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn1r18Q8R2C8 299 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Dennd2dQ91VV4 469 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ndufa5Q9CPP6 116 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zdhhc6Q9CPV7 413 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Trmt5Q9D0C4 501 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm3854A0A1B0GSS6 495 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm6592A2AHC7 168 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pgam2O70250 253 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Arl6O88848 186 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 ThpoP40226 356 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Aqp8P56404 261 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tsc22d1P62500 1077 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rps17P63276 135 aaKnown RBP9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cct3P80318 545 aaKnown RBP9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Txnl4aP83877 142 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Hp1bp3Q3TEA8 554 aaKnown RBP9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Laptm5Q61168 261 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Timm29Q8BGX2 266 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Faim2Q8K097 317 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Kremen2Q8K1S7 461 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn1r219Q8R271 312 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Pdzd3Q99MJ6 498 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tex47Q9D5W8 253 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 H2bfmQ9DAB5 224 aa9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mkrn2Q9ERV1 416 aaKnown RBP9.96□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 ItpkbB2RXC2 942 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Phf11cB4XVP9 339 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mtnd5P03921 607 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Chrm1P12657 460 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Plin2P43883 425 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 PitpnaP53810 271 aaKnown RBP9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Hepacam2Q4VAH7 463 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Scgb1c1Q7M742 95 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Znf410Q8BKX7 478 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 BtdQ8CIF4 520 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slc38a4Q8R1S9 547 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Aspscr1Q8VBT9 550 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ms4a10Q99N03 267 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Q9D112 206 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 GhrlQ9EQX0 117 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 CcniQ9Z2V9 377 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Marf1Q8BJ34 1730 aaKnown RBP9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Greb1lB9EJV3 1913 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm20503G3UZK1 150 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm3159K7N760 267 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm6356L7N2A7 188 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cacng1O70578 223 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mthfd2P18155 350 aaKnown RBP9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gdf5P43027 495 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Rgs16P97428 201 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cmklr1P97468 371 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pld2P97813 933 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 E330014E10RikQ3UL33 481 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 D5Ertd577eQ499F0 481 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Sema3gQ4LFA9 780 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Coq8bQ566J8 533 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cxcl17Q5UW37 119 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Htr1aQ64264 421 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ces2bQ6PDB7 556 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Kctd7Q8BJK1 289 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Atat1Q8K341 421 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Camkk1Q8VBY2 505 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mat1aQ91X83 396 aaKnown RBP9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Kdelr2Q9CQM2 212 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Csnk1dQ9DC28 415 aa9.96□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Kcnab2P62482 367 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nol9Q3TZX8 714 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Prrt3Q6PE13 971 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cstf2Q8BIQ5 580 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tmem214Q8BM55 687 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms