RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	NSG1	A0A0A6YYJ2	146 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	CCDC189	A1A4V9	331 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	ZNF860	A6NHJ4	632 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	SYCE1L	A8MT33	242 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	UBXN8	O00124	270 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	CCNT2	O60583	730 aa	Known RBP	14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	KLHL2	O95198	593 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	ALDOA	P04075	364 aa	Known RBP	14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	RHOXF2B	P0C7M4	288 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	C8orf89	P0DMQ9	161 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	IL10	P22301	178 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	GSTM2	P28161	218 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	HNF4A	P41235	474 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	SERPINB9	P50453	376 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	EFNA3	P52797	238 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	MLLT10	P55197	1068 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	KCNC4	Q03721	635 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939		Q0VFX4	171 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	HYAL2	Q12891	473 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	ACAP2	Q15057	778 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	XKR6	Q5GH73	641 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	AGAP7P	Q5VUJ5	663 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	SLC6A19	Q695T7	634 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	KLC3	Q6P597	504 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	TAOK1	Q7L7X3	1001 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	LRRC70	Q7Z2Q7	622 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	KBTBD2	Q8IY47	623 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	SHISA5	Q8N114	240 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	UBTD2	Q8WUN7	234 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	METTL21A	Q8WXB1	218 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	TM9SF4	Q92544	642 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	PEX11G	Q96HA9	241 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	THOC3	Q96J01	351 aa	Known RBP	14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	AGAP4	Q96P64	663 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	OR1F2P	Q96R84	312 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	PAFAH2	Q99487	392 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	RHOXF2	Q9BQY4	288 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	ZNF700	Q9H0M5	742 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	KLHL31	Q9H511	634 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	NT5DC2	Q9H857	520 aa		14.2	□□□□□ -0.14
PHGDH-231	ENST00000641939	CPAMD8	Q8IZJ3	1885 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939		A0A087WUV0	522 aa	Predicted RBP	14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	TTLL8	A6PVC2	850 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	PRAMEF4	O60810	478 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	KRT38	O76015	456 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	SORBS2	O94875	1100 aa	Known RBP	14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	B3GALT4	O96024	378 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	SMIM10L1	P0DMW3	83 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	MSH2	P43246	934 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	GLRB	P48167	497 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	CD97	P48960	835 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	RAB8A	P61006	207 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	STXBP1	P61764	594 aa	Known RBP	14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	FOXK1	P85037	733 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	DOC2A	Q14183	400 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	PCOLCE	Q15113	449 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	TOR1AIP1	Q5JTV8	583 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	PRAMEF9	Q5VWM5	478 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	ZADH2	Q8N4Q0	377 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	OR5T3	Q8NGG3	340 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	UHMK1	Q8TAS1	419 aa	Known RBP	14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	CCT6B	Q92526	530 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	ISL2	Q96A47	359 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	PNPLA2	Q96AD5	504 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	WDR34	Q96EX3	536 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	PTCD3	Q96EY7	689 aa	Known RBP	14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	SMIM10	Q96HG1	83 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	SEC16B	Q96JE7	1060 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	EFCAB11	Q9BUY7	163 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	VPS11	Q9H270	941 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	CLK4	Q9HAZ1	481 aa	Known RBP	14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	ZBTB20	Q9HC78	741 aa	Predicted RBP	14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	RIC8B	Q9NVN3	520 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	C19orf25	Q9UFG5	118 aa	Predicted RBP	14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	ASB1	Q9Y576	335 aa		14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	FLNB	O75369	2602 aa	Known RBP	14.19	□□□□□ -0.14
PHGDH-231	ENST00000641939	ANKDD1B	A6NHY2	528 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	POC1B-GALNT4	F8VUJ3	575 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939		K7EPI3	171 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	CHST10	O43529	356 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	CLEC3A	O75596	197 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	FH	P07954	510 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	ABHD2	P08910	425 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	PRR35	P0CG20	571 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	MTHFD2	P13995	350 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	MAGEA12	P43365	314 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	AGTR2	P50052	363 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	IRF8	Q02556	426 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	CHIT1	Q13231	466 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	LAPTM5	Q13571	262 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	TBCC	Q15814	346 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	IGFBP7	Q16270	282 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	HIST2H2AC	Q16777	129 aa	Predicted RBP	14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	PAGE2B	Q5JRK9	111 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	HIST2H2AA3	Q6FI13	130 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	LANCL3	Q6ZV70	420 aa		14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	TRMT10C	Q7L0Y3	403 aa	Known RBP	14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	CPEB2	Q7Z5Q1	589 aa	Known RBP	14.18	□□□□□ -0.14
PHGDH-231	ENST00000641939	TBC1D20	Q96BZ9	403 aa		14.18	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms