RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TUBA8Q9NY65 449 aaPredicted RBP13.91□□□□□ -0.18
SCARB2-216ENST00000639300 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
SCARB2-216ENST00000639300 SMCHD1A6NHR9 2005 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 FAM92AA1XBS5 289 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ACOX3O15254 700 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 APOL3O95236 402 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 IL3P08700 152 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 TBPL1P62380 186 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 RHAGQ02094 409 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 HS3ST5Q8IZT8 346 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 GPR26Q8NDV2 337 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 TTLQ8NG68 377 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 HUS1BQ8NHY5 278 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 MAL2Q969L2 176 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ZFP3Q96NJ6 502 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 F2RL3Q96RI0 385 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ATOH8Q96SQ7 321 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ITPAQ9BY32 194 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 RPRD1BQ9NQG5 326 aaKnown RBP13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ERVK-18Q9QC07 812 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ST14Q9Y5Y6 855 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 DUXAA6NLW8 204 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 DRGXA6NNA5 263 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 TCEA1P23193 301 aaKnown RBP13.91□□□□□ -0.18
SCARB2-216ENST00000639300 TIA1P31483 386 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCARB2-216ENST00000639300 MVKQ03426 396 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 FAM46DQ8NEK8 389 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 OR6K6Q8NGW6 343 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 HDAC2Q92769 488 aaKnown RBP13.91□□□□□ -0.18
SCARB2-216ENST00000639300 PMEPA1Q969W9 287 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 TMEM9Q9P0T7 183 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 EBF1Q9UH73 591 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 CFL2Q9Y281 166 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 H0YAE9 185 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 BMP2P12643 396 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF829Q3KNS6 432 aaPredicted RBP13.91□□□□□ -0.18
SCARB2-216ENST00000639300 KLHL22Q53GT1 634 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 SLC8B1Q6J4K2 584 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 FRRS1Q6ZNA5 592 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 LSMEM2Q8N112 164 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 HERC2P3Q9BVR0 1158 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 RETREG1Q9H6L5 497 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF696Q9H7X3 374 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 IL1RAPQ9NPH3 570 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 SLAMF8Q9P0V8 285 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 PCDHB14Q9Y5E9 798 aa13.91□□□□□ -0.18
SCARB2-216ENST00000639300 WASH4PA8MWX3 477 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 MITFO75030 526 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 SRPRAP08240 638 aaKnown RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 ETFAP13804 333 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 CPOXP36551 454 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 CTSOP43234 321 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 ADAM17P78536 824 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 HYAL2Q12891 473 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 LRP8Q14114 963 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 CNTN4Q8IWV2 1026 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 SAMD14Q8IZD0 417 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 FIBINQ8TAL6 211 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 FRS2Q8WU20 508 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 TMEM125Q96AQ2 219 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 DMRTB1Q96MA1 342 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 RIPOR3Q96MK2 946 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 RAB11FIP5Q9BXF6 653 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 ELL3Q9HB65 397 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 DAPL1A0PJW8 107 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 ZNF860A6NHJ4 632 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 KMOO15229 486 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 KHDRBS3O75525 346 aaKnown RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 DHFRP00374 187 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 GPR150Q8NGU9 434 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 RHBDF1Q96CC6 855 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 SLC39A13Q96H72 371 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 CAMK1GQ96NX5 476 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 SLC38A3Q99624 504 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 INPP5KQ9BT40 448 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 MAN2B2Q9Y2E5 1009 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 MAGED1Q9Y5V3 778 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 CACNA1CQ13936 2221 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 RPS17P08708 135 aaKnown RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 ATXN1LP0C7T5 689 aaKnown RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 TNFRSF1BP20333 461 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 OMPP47874 163 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 MLLT1Q03111 559 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 ST3GAL4Q11206 333 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 NDUFA9Q16795 377 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 TOR1AIP1Q5JTV8 583 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 TPRG1LQ5T0D9 272 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 SLC30A6Q6NXT4 461 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 ERN2Q76MJ5 926 aaKnown RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 MAVSQ7Z434 540 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 TRAM1L1Q8N609 369 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 FBXO15Q8NCQ5 510 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-216ENST00000639300 UFD1Q92890 307 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 C5orf34Q96MH7 638 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 GAL3ST1Q99999 423 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 ANKRA2Q9H9E1 313 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 NEUROD4Q9HD90 331 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 TMEM30AQ9NV96 361 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 FAM118AQ9NWS6 357 aa13.9□□□□□ -0.18
SCARB2-216ENST00000639300 HCFC1R1Q9NWW0 138 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms