RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	HTRA3	P83110	453 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	SMARCB1	Q12824	385 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TUSC3	Q13454	348 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TNK1	Q13470	666 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ARMC12	Q5T9G4	340 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TIGD3	Q6B0B8	471 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ZNF683	Q8IZ20	524 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	WDR36	Q8NI36	951 aa	Known RBP	13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	NELL1	Q92832	810 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CDCA4	Q9BXL8	241 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TMEM39A	Q9NV64	488 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	WWOX	Q9NZC7	414 aa		13.18	□□□□□ -0.3
KCNMA1-238	ENST00000638514	SLC35F4	A4IF30	521 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514		H3BM21	787 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TNFRSF11B	O00300	401 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TAPBP	O15533	448 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	OR2B3	O76000	313 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	MSL3P1	P0C860	447 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PSKH1	P11801	424 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CLCN4	P51793	760 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CDH18	Q13634	790 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	MS4A13	Q5J8X5	152 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	SLC35F1	Q5T1Q4	408 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PTRHD1	Q6GMV3	140 aa	Known RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PAMR1	Q6UXH9	720 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	RNF165	Q6ZSG1	346 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	MDGA1	Q8NFP4	955 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	REPS1	Q96D71	796 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TRIB3	Q96RU7	358 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CCSER2	Q9H7U1	834 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ELOVL2	Q9NXB9	296 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TMPRSS11E	Q9UL52	423 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PCDHGA2	Q9Y5H1	932 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514		M0R129	80 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	OR7A10	O76100	309 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	EPN2	O95208	641 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	C1QC	P02747	245 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	SERINC3	Q13530	473 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	C5orf22	Q49AR2	442 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PDZK1	Q5T2W1	519 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	LRRC66	Q68CR7	880 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	FAM171B	Q6P995	826 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CREB3L2	Q70SY1	520 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	FAM124A	Q86V42	546 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	AMIGO1	Q86WK6	493 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	HS6ST3	Q8IZP7	471 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	SLC5A8	Q8N695	610 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	OR10G2	Q8NGC3	310 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	C7orf34	Q96L11	122 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PSKH2	Q96QS6	385 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ZMAT5	Q9UDW3	170 aa	Known RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PPT2	Q9UMR5	302 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CFAP20	Q9Y6A4	193 aa	Known RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	LTBP3	Q9NS15	1303 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	LRAT	O95237	230 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	GLUD1	P00367	558 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	C1QB	P02746	253 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CYP2A6	P11509	494 aa	Predicted RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	XPA	P23025	273 aa	Predicted RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CLCN7	P51798	805 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ZNF177	Q13360	481 aa	Predicted RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	IQCC	Q4KMZ1	466 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CAMKK1	Q8N5S9	505 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	DPH2	Q9BQC3	489 aa	Predicted RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TMEM245	Q9H330	911 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TRPS1	Q9UHF7	1281 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	VPS4A	Q9UN37	437 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	POFUT2	Q9Y2G5	429 aa		13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	NUP214	P35658	2090 aa	Predicted RBP	13.17	□□□□□ -0.3
KCNMA1-238	ENST00000638514	RHOC	P08134	193 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	CSF3	P09919	207 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PRPS2	P11908	318 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	POU3F3	P20264	500 aa	Predicted RBP	13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PTPRR	Q15256	657 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	NLRP8	Q86W28	1048 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PTOV1	Q86YD1	416 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	UBE2J2	Q8N2K1	259 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	SH3KBP1	Q96B97	665 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TAPBPL	Q9BX59	468 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ZNF556	Q9HAH1	456 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	DHRS7	Q9Y394	339 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	DOCK4	Q8N1I0	1966 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TEX51	A0A1B0GUA7	166 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	LOC730098	B7Z3J9	87 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PDE9A	O76083	593 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	GJA1	P17302	382 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	LPO	P22079	712 aa	Predicted RBP	13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	KIR2DL3	P43628	341 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	HOXC5	Q00444	222 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	PPIG	Q13427	754 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ZNF648	Q5T619	568 aa	Predicted RBP	13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	FAM9C	Q8IZT9	166 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	IGSF8	Q969P0	613 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	ACBD6	Q9BR61	282 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	MAPRE3	Q9UPY8	281 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	TLR6	Q9Y2C9	796 aa		13.16	□□□□□ -0.3
KCNMA1-238	ENST00000638514	MANSC4	A6NHS7	340 aa	Predicted RBP	13.16	□□□□□ -0.3

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