RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-223ENST00000637033 H3BN98 237 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 HMGA1P17096 107 aaKnown RBP12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 PRPS1L1P21108 318 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 NSG1P42857 185 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 ITGA1P56199 1179 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 RPS13P62277 151 aaKnown RBP12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 PTSQ03393 145 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 STARD3Q14849 445 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 GPR162Q16538 588 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 C17orf99Q6UX52 265 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 TMPRSS11BQ86T26 416 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 GLCCI1Q86VQ1 547 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 RNF130Q86XS8 419 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 LAX1Q8IWV1 398 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 MYDGFQ969H8 173 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 FAM129BQ96TA1 746 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 BRD9Q9H8M2 597 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 RRAGCQ9HB90 399 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 MAN2B2Q9Y2E5 1009 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 Q9Y3F1 56 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 PCDHGB3Q9Y5G1 929 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 VWA8A3KMH1 1905 aa12.54□□□□□ -0.4
CHRNA7-223ENST00000637033 PRAMEF33A0A0G2JMD5 474 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 CLDN24A6NM45 220 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 DYRK3O43781 588 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 PRAMEF10O60809 474 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 APOA1P02647 267 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 GALTP07902 379 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 SDHBP21912 280 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 CNR2P34972 360 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 PFN3P60673 137 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 PTGES3Q15185 160 aaKnown RBP12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 BAK1Q16611 211 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 DEFB128Q7Z7B8 93 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 TAGAPQ8N103 731 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 IQCF1Q8N6M8 205 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 CHST14Q8NCH0 376 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 SORCS1Q8WY21 1168 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 HTATIP2Q9BUP3 242 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 GPATCH2Q9NW75 528 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 KLHL3Q9UH77 587 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 CFAP20Q9Y6A4 193 aaKnown RBP12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 CKAP5Q14008 2032 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 MYO10Q9HD67 2058 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 FAM47E-STBD1D6RA91 191 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 GPX5O75715 221 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 GPX2P18283 190 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 TNFSF8P32971 234 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 SLAMF1Q13291 335 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 MRPL58Q14197 206 aaKnown RBP12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 ARMC4Q5T2S8 1044 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 TNFAIP8L2Q6P589 184 aaPredicted RBP12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 TMIGD1Q6UXZ0 262 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 Q6ZVL8 140 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 CAMKK1Q8N5S9 505 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 TRMT61AQ96FX7 289 aaKnown RBP12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 FYTTD1Q96QD9 318 aaKnown RBP12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 DOHHQ9BU89 302 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 TMPRSS11EQ9UL52 423 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 PCDHB11Q9Y5F2 797 aa12.53□□□□□ -0.4
CHRNA7-223ENST00000637033 TMEM229AB2RXF0 380 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 HAT1O14929 419 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 SEPT4O43236 478 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 SNX4O95219 450 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 GASTP01350 101 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 STATHP02808 62 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 PDHA2P29803 388 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 CHI3L1P36222 383 aaPredicted RBP12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 GGT2P36268 569 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 RPS19P39019 145 aaKnown RBP12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 SLC15A1P46059 708 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 CXCR4P61073 352 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 CD83Q01151 205 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 TCTN1Q2MV58 587 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 IQCCQ4KMZ1 466 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 ATAD3CQ5T2N8 411 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 FAHD1Q6P587 224 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 RBM45Q8IUH3 476 aaKnown RBP12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 RAB8BQ92930 207 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 CLSTN3Q9BQT9 956 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 ZNF556Q9HAH1 456 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 YARS2Q9Y2Z4 477 aaKnown RBP12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 CHD7Q9P2D1 2997 aa12.52□□□□□ -0.4
CHRNA7-223ENST00000637033 KCNE1BA0A087WTH5 132 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 EFCAB10A6NFE3 127 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 DNAJB5O75953 348 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 SLC16A8O95907 504 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 HOXB9P17482 250 aaPredicted RBP12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 UGT2B15P54855 530 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 LMAN2Q12907 356 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 BCL2A1Q16548 175 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 DUSP7Q16829 419 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 SNAP47Q5SQN1 464 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 LIPKQ5VXJ0 399 aa12.52□□□□□ -0.41
CHRNA7-223ENST00000637033 Q6ZVU0 165 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms