RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 STON2Q8WXE9 905 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SH3KBP1Q96B97 665 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CXorf40BQ96DE9 158 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 VAT1Q99536 393 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 KCNJ15Q99712 375 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 G6PC3Q9BUM1 346 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 POLR1EQ9GZS1 481 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 IL1RAPL1Q9NZN1 696 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 STX18Q9P2W9 335 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PADI1Q9ULC6 663 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 GPR45Q9Y5Y3 372 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SLC30A1Q9Y6M5 507 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ACANP16112 2415 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 JMJD1CQ15652 2540 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 A0A0J9YYE9 177 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 G3V2L1 256 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 H0Y3Z8 333 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 H3BML4 177 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 UBXN7O94888 489 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 JCHAINP01591 159 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 TRBC1P01850 177 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 KITP10721 976 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PGM1P36871 562 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CD86P42081 329 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CPA2P48052 419 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ARCN1P48444 511 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PPP1CAP62136 330 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 DNASE1L3Q13609 305 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 LRP8Q14114 963 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PRR30Q53SZ7 412 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ITPRIPL1Q6GPH6 555 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CES3Q6UWW8 571 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 TECPR1Q7Z6L1 1165 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PPP1R3BQ86XI6 285 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 FAM20CQ8IXL6 584 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ARHGAP24Q8N264 748 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PLD6Q8N2A8 252 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PIH1D2Q8WWB5 315 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 MR1Q95460 341 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 MCUR1Q96AQ8 359 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 FAM136AQ96C01 138 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 MIEF2Q96C03 454 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SLC25A23Q9BV35 468 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 WDR12Q9GZL7 423 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ACTL8Q9H568 366 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 FAM96AQ9H5X1 160 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 BPIFA1Q9NP55 256 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SARS2Q9NP81 518 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 NMRK1Q9NWW6 199 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 KCTD5Q9NXV2 234 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 STOML1Q9UBI4 398 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 TNRC6AQ8NDV7 1962 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 FADS2P1A8MWK0 482 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CDK14O94921 469 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 RNF224P0DH78 156 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF8P17098 575 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SPRP35270 261 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 GMPRP36959 345 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 VHLP40337 213 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 NPY2RP49146 381 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ACTR3P61158 418 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ABCE1P61221 599 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 RAC1P63000 192 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SLC34A1Q06495 639 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 TRMT5Q32P41 509 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PRAMEF17Q5VTA0 474 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF787Q6DD87 383 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 TCTN3Q6NUS6 607 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CERS6Q6ZMG9 384 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CMC1Q7Z7K0 106 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 MYLK4Q86YV6 388 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 CNTN4Q8IWV2 1026 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ULK2Q8IYT8 1036 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 MEGF10Q96KG7 1140 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 PANX3Q96QZ0 392 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 GPR22Q99680 433 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 DPYSL5Q9BPU6 564 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 MGME1Q9BQP7 344 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 KIFC1Q9BW19 673 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SSBP4Q9BWG4 385 aaPredicted RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 GPR63Q9BZJ6 419 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SLC7A5P2Q9GIP4 190 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 IL22Q9GZX6 179 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 TRIT1Q9H3H1 467 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ACSS2Q9NR19 701 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 IMP3Q9NV31 184 aaKnown RBP4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SOHLH2Q9NX45 425 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 BFARQ9NZS9 450 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ATXN10Q9UBB4 475 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 SLC23A2Q9UGH3 650 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 ADGRG4Q8IZF6 3080 aa4.66□□□□□ -1.66
LINC00550-201ENST00000629293 A0A088AWK7 358 aa4.65□□□□□ -1.66
LINC00550-201ENST00000629293 A0A1W2PQ67 120 aa4.65□□□□□ -1.66
LINC00550-201ENST00000629293 MAGEB16A2A368 324 aa4.65□□□□□ -1.66
LINC00550-201ENST00000629293 TMEM114B3SHH9 223 aa4.65□□□□□ -1.66
LINC00550-201ENST00000629293 BUD23O43709 281 aaKnown RBP4.65□□□□□ -1.66
LINC00550-201ENST00000629293 RALBP11234 206 aa4.65□□□□□ -1.66
LINC00550-201ENST00000629293 OSMP13725 252 aa4.65□□□□□ -1.66
LINC00550-201ENST00000629293 CPA3P15088 417 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms