RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 NSUN3Q9H649 340 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ZDHHC6Q9H6R6 413 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SIAEQ9HAT2 523 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CLDND1Q9NY35 253 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PTPRSQ13332 1948 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PLXNA4Q9HCM2 1894 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 A0A0U1RQS6 177 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 TRIM64BA6NI03 449 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 HEPACAM2A8MVW5 462 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC16A6O15403 523 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 DIRAS1O95057 198 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CD160O95971 181 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 LCKP06239 509 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PRR35P0CG20 571 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ADH5P11766 374 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ITGALP20701 1170 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SERPINA4P29622 427 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 KRT20P35900 424 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 DGKGP49619 791 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 AP1S1P61966 158 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SEMG2Q02383 582 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 KEAP1Q14145 624 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 SF3B4Q15427 424 aaKnown RBP eCLIP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 TYSND1Q2T9J0 566 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 GPR153Q6NV75 609 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ERICH5Q6P6B1 374 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 NCEH1Q6PIU2 408 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CCBE1Q6UXH8 406 aaPredicted RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 Q6ZSR9 355 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 TAGAPQ8N103 731 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 VN1R2Q8NFZ6 395 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 RPL3LQ92901 407 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 FKBP10Q96AY3 582 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ASIC4Q96FT7 647 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 CDCA3Q99618 268 aaPredicted RBP6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 AMBNQ9NP70 447 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ACOT13Q9NPJ3 140 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 LHX3Q9UBR4 397 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 AASSQ9UDR5 926 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 MKLN1Q9UL63 735 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PCDHB1Q9Y5F3 818 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 PCDHGB3Q9Y5G1 929 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 ALPK3Q96L96 1907 aa6.75□□□□□ -1.33
SRGAP3-213ENST00000618999 AGAP5A6NIR3 686 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM25AB3EWG3 89 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM25CB3EWG5 89 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM25GB3EWG6 89 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 UPK1AO00322 258 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 PLK4O00444 970 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 OR1I1O60431 355 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 MRPS14O60783 128 aaKnown RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 CR2P20023 1033 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 XPAP23025 273 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 KIR3DL1P43629 444 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 PTPRRQ15256 657 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 GTDC1Q4AE62 458 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 SYT6Q5T7P8 510 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 Q6ZVU0 165 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 GPR149Q86SP6 731 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 TSPYL5Q86VY4 417 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 LACC1Q8IV20 430 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 TEX19Q8NA77 164 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 OR2AP1Q8NGE2 309 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 THAP3Q8WTV1 239 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ATL1Q8WXF7 558 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 GTF2H4Q92759 462 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 MYO19Q96H55 970 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 TXNDC15Q96J42 360 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 LRRC3BQ96PB8 259 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 TP63Q9H3D4 680 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ITM2CQ9NQX7 267 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 DEC1Q9P2X7 70 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 DKK3Q9UBP4 350 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 SNX6Q9UNH7 406 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 SATB2Q9UPW6 733 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 SPO11Q9Y5K1 396 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 E2F3O00716 465 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 PRSS23O95084 383 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 NFATC1O95644 943 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 IL33O95760 270 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ALPIP09923 528 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 SRCP12931 536 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 EIF2DP41214 584 aaKnown RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC15A1P46059 708 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 SELENBP1Q13228 472 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 MED22Q15528 200 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 DGKKQ5KSL6 1271 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ASTLQ6HA08 431 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 KIAA1211LQ6NV74 962 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 VHLLQ6RSH7 139 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 RAB43Q86YS6 212 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 SYT12Q8IV01 421 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 LYSMD2Q8IV50 215 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 CHCHD4Q8N4Q1 142 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 KRTCAP2Q8N6L1 136 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF366Q8N895 744 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF511Q8NB15 262 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 FLCNQ8NFG4 579 aa6.74□□□□□ -1.33
SRGAP3-213ENST00000618999 DYNC2LI1Q8TCX1 351 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms