RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ASCL3Q9NQ33 180 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 SAR1AQ9NR31 198 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 EVA1BQ9NVM1 165 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 C1orf109Q9NX04 203 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 ZFP69BQ9UJL9 534 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 TMED5Q9Y3A6 229 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 UNC13CQ8NB66 2214 aa10.93□□□□□ -0.66
SLIRP-212ENST00000613856 TLCD2A6NGC4 264 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 CCT8L1PA6NM43 557 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 MAGEB17A8MXT2 336 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 UBDO15205 165 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 PEX11AO75192 247 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 CLEC3AO75596 197 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 SEMA3DO95025 777 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 ALDOCP09972 364 aaKnown RBP10.92□□□□□ -0.66
SLIRP-212ENST00000613856 CKMT1AP12532 417 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 IDO1P14902 403 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 MAGP20916 626 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 ACP1P24666 158 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 BCL6P41182 706 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 LSSP48449 732 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 PCBP4P57723 403 aaKnown RBP10.92□□□□□ -0.66
SLIRP-212ENST00000613856 PPP1CAP62136 330 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 HMGCS1Q01581 520 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 EMX2Q04743 252 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 SQSTM1Q13501 440 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 CUL3Q13618 768 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 DDX39BQ13838 428 aaKnown RBP10.92□□□□□ -0.66
SLIRP-212ENST00000613856 SQLEQ14534 574 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 RBBP5Q15291 538 aaKnown RBP10.92□□□□□ -0.66
SLIRP-212ENST00000613856 GSTA3Q16772 222 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 TMEM198Q66K66 360 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 FCRL6Q6DN72 434 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 ADNP2Q6IQ32 1131 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 FIGLAQ6QHK4 219 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 RNF44Q7L0R7 432 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 SPRED1Q7Z699 444 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 FAM20CQ8IXL6 584 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 FITM2Q8N6M3 262 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 ANKRD53Q8N9V6 530 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 MFSD9Q8NBP5 474 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 CCDC74AQ96AQ1 378 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 MTERF1Q99551 399 aaKnown RBP10.92□□□□□ -0.66
SLIRP-212ENST00000613856 SERPINI1Q99574 410 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 MS4A8Q9BY19 250 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 CHRNA10Q9GZZ6 450 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 C1GALT1Q9NS00 363 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 AIG1Q9NVV5 245 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 NMRK1Q9NWW6 199 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 SIRT5Q9NXA8 310 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 VPS29Q9UBQ0 182 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 GIMAP2Q9UG22 337 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 PILRAQ9UKJ1 303 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 AP1M2Q9Y6Q5 423 aa10.92□□□□□ -0.66
SLIRP-212ENST00000613856 FEZF1A0PJY2 475 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 ANKDD1BA6NHY2 528 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 CAPN5O15484 640 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 OR1F1O43749 312 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 NRP2O60462 931 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 C9P02748 559 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 NCF2P19878 526 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 CDH3P22223 829 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 PTX3P26022 381 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 MAPK1P28482 360 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 DUSP3P51452 185 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 ARFIP1P53367 373 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 OR1D5P58170 312 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 RPS13P62277 151 aaKnown RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 RPL38P63173 70 aaKnown RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 KIAA0040Q15053 153 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 ZIC1Q15915 447 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 ZSCAN26Q16670 478 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 CLPPQ16740 277 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 AP5B1Q2VPB7 878 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 GALNTL6Q49A17 601 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 SPIN4Q56A73 249 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 CDCP2Q5VXM1 449 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 GUSBP11Q6P575 273 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 FOXR1Q6PIV2 292 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 WDR74Q6RFH5 385 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 C19orf47Q8N9M1 422 aaKnown RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 FNDC5Q8NAU1 212 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 TRPV3Q8NET8 790 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 CREB3L4Q8TEY5 395 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 KCNE4Q8WWG9 221 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 MTFMTQ96DP5 389 aaKnown RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 C11orf24Q96F05 449 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 ZDHHC12Q96GR4 267 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 AHCYL2Q96HN2 611 aaKnown RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 CATSPER2Q96P56 530 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 TRAPPC9Q96Q05 1148 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 CCDC106Q9BWC9 280 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 BRINP2Q9C0B6 783 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 SDR39U1Q9NRG7 319 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 TMEM45AQ9NWC5 275 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 NOP53Q9NZM5 478 aaKnown RBP10.91□□□□□ -0.66
SLIRP-212ENST00000613856 SEMA5BQ9P283 1151 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 SLC12A4Q9UP95 1085 aa10.91□□□□□ -0.66
SLIRP-212ENST00000613856 COPG1Q9Y678 874 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms