RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 SCN3AQ9NY46 2000 aa15.77■□□□□ 0.11
IRF1-211ENST00000613424 CCDC88CQ9P219 2028 aa15.77■□□□□ 0.11
IRF1-211ENST00000613424 LRIT2A6NDA9 550 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 URADA6NGE7 173 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 H0YIG0 161 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 SGK494L7N484 410 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 TYROBPO43914 113 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 RECKO95980 971 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 B3GALT4O96024 378 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 ZNF888P0CJ79 500 aaPredicted RBP15.76■□□□□ 0.11
IRF1-211ENST00000613424 PCNAP12004 261 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 ALOX12P18054 663 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 ARL1P40616 181 aaPredicted RBP15.76■□□□□ 0.11
IRF1-211ENST00000613424 FOXL2P58012 376 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 STXBP1P61764 594 aaKnown RBP15.76■□□□□ 0.11
IRF1-211ENST00000613424 MC1RQ01726 317 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 TRAF3Q13114 568 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 DSG2Q14126 1118 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 ERV3-1Q14264 604 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 RBBP7Q16576 425 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 CPSF6Q16630 551 aaKnown RBP eCLIP15.76■□□□□ 0.11
IRF1-211ENST00000613424 TOR1AIP1Q5JTV8 583 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 ABHD13Q7L211 337 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 MILR1Q7Z6M3 343 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 SYVN1Q86TM6 617 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 PDSS2Q86YH6 399 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 TMEM151BQ8IW70 566 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 AMER3Q8N944 861 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 TCP10LQ8TDR4 215 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 TRPC4APQ8TEL6 797 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 ZNF473Q8WTR7 871 aaKnown RBP15.76■□□□□ 0.11
IRF1-211ENST00000613424 FAM111AQ96PZ2 611 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 YIPF2Q9BWQ6 316 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 OXSMQ9NWU1 459 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 SLC17A7Q9P2U7 560 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 PTRH2Q9Y3E5 179 aaKnown RBP15.76■□□□□ 0.11
IRF1-211ENST00000613424 NAALAD2Q9Y3Q0 740 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 PCDHGA11Q9Y5H2 935 aa15.76■□□□□ 0.11
IRF1-211ENST00000613424 A0A1B0GTL3 188 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 VSTM2BA6NLU5 285 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 H0YIV9 168 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 FFAR3O14843 346 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 GPR42O15529 346 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 PRPF4O43172 522 aaKnown RBP eCLIP15.75■□□□□ 0.11
IRF1-211ENST00000613424 KLHL18O94889 574 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 OTCP00480 354 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 FURINP09958 794 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 MYZAPP0CAP1 466 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 PRKAR1AP10644 381 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 H2AFXP16104 143 aaPredicted RBP15.75■□□□□ 0.11
IRF1-211ENST00000613424 HNRNPH1P31943 449 aaKnown RBP15.75■□□□□ 0.11
IRF1-211ENST00000613424 DNAJB13P59910 316 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 RAB8AP61006 207 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 MAT1AQ00266 395 aaKnown RBP15.75■□□□□ 0.11
IRF1-211ENST00000613424 ZRSR2Q15696 482 aaKnown RBP15.75■□□□□ 0.11
IRF1-211ENST00000613424 NKG7Q16617 165 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 SYT16Q17RD7 645 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 DEFB134Q4QY38 66 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 CRTC2Q53ET0 693 aaPredicted RBP15.75■□□□□ 0.11
IRF1-211ENST00000613424 VWA2Q5GFL6 755 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 ATP1A1-AS1Q5TC04 95 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 GPR155Q7Z3F1 870 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 C10orf107Q8IVU9 208 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 RNF175Q8N4F7 328 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 CCNYL1Q8N7R7 359 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 OR4F6Q8NGB9 312 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 HUS1BQ8NHY5 278 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 MS4A6EQ96DS6 147 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 WDR54Q9H977 334 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 PRM3Q9NNZ6 103 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 ARGLU1Q9NWB6 273 aaPredicted RBP15.75■□□□□ 0.11
IRF1-211ENST00000613424 TRPC4Q9UBN4 977 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 CTSFQ9UBX1 484 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 ZNF282Q9UDV7 671 aaPredicted RBP15.75■□□□□ 0.11
IRF1-211ENST00000613424 ADGRE2Q9UHX3 823 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 MID2Q9UJV3 735 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 ZNF225Q9UK10 706 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 PADI2Q9Y2J8 665 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 TSC22D4Q9Y3Q8 395 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 MAP4K5Q9Y4K4 846 aa15.75■□□□□ 0.11
IRF1-211ENST00000613424 IGLV3-12A0A075B6K2 115 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 C4orf51C9J302 202 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 GALR3O60755 368 aaPredicted RBP15.74■□□□□ 0.11
IRF1-211ENST00000613424 DNAJB6O75190 326 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 TGFB1P01137 390 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 ZGLP1P0C6A0 271 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 SERPINB1P30740 379 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 NAGLUP54802 743 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 OCA2Q04671 838 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 IL10RAQ13651 578 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 DDX39BQ13838 428 aaKnown RBP15.74■□□□□ 0.11
IRF1-211ENST00000613424 PCLAFQ15004 111 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 UGT8Q16880 541 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 ADPRMQ3LIE5 342 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 SHISA6Q6ZSJ9 500 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 SHISA5Q8N114 240 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 OR2Y1Q8NGV0 311 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 WDR20Q8TBZ3 569 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 STT3BQ8TCJ2 826 aa15.74■□□□□ 0.11
IRF1-211ENST00000613424 REPS1Q96D71 796 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms