RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 NAA30Q147X3 362 aaPredicted RBP16.7■□□□□ 0.26
SSBP1-215ENST00000612337 BBS9Q3SYG4 887 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 DEFB134Q4QY38 66 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 CATSPEREQ5SY80 951 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 SPINK14Q6IE38 97 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 BNC2Q6ZN30 1099 aaPredicted RBP16.7■□□□□ 0.26
SSBP1-215ENST00000612337 ABHD13Q7L211 337 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 GPATCH11Q8N954 259 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 TMEM178AQ8NBL3 297 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 NT5CQ8TCD5 201 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 ELP5Q8TE02 316 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 THAP3Q8WTV1 239 aaPredicted RBP16.7■□□□□ 0.26
SSBP1-215ENST00000612337 NEIL2Q969S2 332 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 PDLIM5Q96HC4 596 aaKnown RBP16.7■□□□□ 0.26
SSBP1-215ENST00000612337 GPR137Q96N19 417 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 HES7Q9BYE0 225 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 DDX47Q9H0S4 455 aaKnown RBP16.7■□□□□ 0.26
SSBP1-215ENST00000612337 KLHL1Q9NR64 748 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 ANKRD10Q9NXR5 420 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 SH3BGRL2Q9UJC5 107 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 ZFP69BQ9UJL9 534 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 SNX12Q9UMY4 172 aa16.7■□□□□ 0.26
SSBP1-215ENST00000612337 CHST10O43529 356 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 DNAJB6O75190 326 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 GUCA1CO95843 209 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 SERPIND1P05546 499 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 IVDP26440 423 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 GRNP28799 593 aaKnown RBP16.69■□□□□ 0.26
SSBP1-215ENST00000612337 EEF1DP29692 281 aaKnown RBP16.69■□□□□ 0.26
SSBP1-215ENST00000612337 AHRP35869 848 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 SCTRP47872 440 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 PGGT1BP53609 377 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 CSHL1Q14406 222 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 KRTCAP3Q53RY4 240 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 FAM45BPQ6NSW5 357 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 SBSNQ6UWP8 590 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 MCEMP1Q8IX19 187 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 HORMAD2Q8N7B1 307 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 FAM45AQ8TCE6 357 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 OLFM1Q99784 485 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 SPNS1Q9H2V7 528 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 GRPEL1Q9HAV7 217 aa16.69■□□□□ 0.26
SSBP1-215ENST00000612337 CLK4Q9HAZ1 481 aaKnown RBP16.69■□□□□ 0.26
SSBP1-215ENST00000612337 PDZD2O15018 2839 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 FAM227AF5H4B4 570 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 NEURL1O76050 574 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 B3GALT4O96024 378 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 ZNF888P0CJ79 500 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-215ENST00000612337 HTR1EP28566 365 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 ST13P50502 369 aaKnown RBP16.68■□□□□ 0.26
SSBP1-215ENST00000612337 OLR1P78380 273 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 REEP5Q00765 189 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 ALDH6A1Q02252 535 aaKnown RBP16.68■□□□□ 0.26
SSBP1-215ENST00000612337 OC90Q02509 493 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-215ENST00000612337 MORF4L2Q15014 288 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 C3AR1Q16581 482 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 ZNF630Q2M218 657 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-215ENST00000612337 TRMT10BQ6PF06 316 aaKnown RBP16.68■□□□□ 0.26
SSBP1-215ENST00000612337 QSOX2Q6ZRP7 698 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 PDIK1LQ8N165 341 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 UTP15Q8TED0 518 aaKnown RBP16.68■□□□□ 0.26
SSBP1-215ENST00000612337 CFAP36Q96G28 342 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 FRMD6Q96NE9 622 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 CDCP1Q9H5V8 836 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 PELI2Q9HAT8 420 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 CHST11Q9NPF2 352 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 ZNF835Q9Y2P0 537 aa16.68■□□□□ 0.26
SSBP1-215ENST00000612337 NCOA6Q14686 2063 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-215ENST00000612337 URADA6NGE7 173 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 NDC80O14777 642 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 PRMT3O60678 531 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 B4GALT2O60909 372 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 SP1P08047 785 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 ELK3P41970 407 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 PPP1R3AQ16821 1122 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 STEAP4Q687X5 459 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 SLC25A25Q6KCM7 469 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 XKRXQ6PP77 449 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 Q6ZPB1 254 aaPredicted RBP16.67■□□□□ 0.26
SSBP1-215ENST00000612337 GALNTL5Q7Z4T8 443 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 RPS19BP1Q86WX3 136 aaKnown RBP16.67■□□□□ 0.26
SSBP1-215ENST00000612337 SIAH3Q8IW03 269 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 KIF2BQ8N4N8 673 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 ANKRD53Q8N9V6 530 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 FAM98AQ8NCA5 519 aaKnown RBP16.67■□□□□ 0.26
SSBP1-215ENST00000612337 TRPV3Q8NET8 790 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 LRRC39Q96DD0 335 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 MAGED4Q96JG8 741 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 TSNARE1Q96NA8 513 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 PTCHD1Q96NR3 888 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 SLC6A16Q9GZN6 736 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 LRFN1Q9P244 771 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 TINAGQ9UJW2 476 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 IKZF3Q9UKT9 509 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 CHMP2BQ9UQN3 213 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 DYRK1BQ9Y463 629 aa16.67■□□□□ 0.26
SSBP1-215ENST00000612337 TEP1Q99973 2627 aaKnown RBP16.66■□□□□ 0.26
SSBP1-215ENST00000612337 GTF3C1Q12789 2109 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 ZSCAN12O43309 604 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 SMIM10L1P0DMW3 83 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms