RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TLR4O00206 839 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 KIAA0513O60268 411 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 LEFTY1O75610 366 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TSPAN12O95859 305 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CH25HO95992 272 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 BMP4P12644 408 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 EPHA2P29317 976 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ADPRMQ3LIE5 342 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 C5orf22Q49AR2 442 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 LY6G5CQ5SRR4 150 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TPGS2Q68CL5 300 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 C16orf62Q7Z3J2 963 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 BTLAQ7Z6A9 289 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 LAPTM4BQ86VI4 370 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 YAF2Q8IY57 180 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 NLGN4XQ8N0W4 816 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SCAIQ8N9R8 606 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CXorf40AQ8TE69 158 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 GEMIN6Q8WXD5 167 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SUSD6Q92537 303 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 QRFPRQ96P65 431 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CITED4Q96RK1 184 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CPPED1Q9BRF8 314 aaPredicted RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 MMP27Q9H306 513 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 GPN2Q9H9Y4 310 aaPredicted RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ZDHHC4Q9NPG8 344 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ZCCHC3Q9NUD5 404 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 C5AR2Q9P296 337 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 HCN4Q9Y3Q4 1203 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 UNCXA6NJT0 531 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC35G4P0C7Q5 338 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ACRP10323 421 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SPINT3P49223 89 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 XKP51811 444 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 PPP5CP53041 499 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 EMP3P54852 163 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SMIM11AP58511 58 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TMEM115Q12893 351 aaPredicted RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SPIN4Q56A73 249 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 MACC1Q6ZN28 852 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 PRSS48Q7RTY5 328 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ZSWIM9Q86XI8 627 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TMEM25Q86YD3 366 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 KREMEN2Q8NCW0 462 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 PAPD5Q8NDF8 572 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 KLK6Q92876 244 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 MUL1Q969V5 352 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SCRN2Q96FV2 425 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TRNT1Q96Q11 434 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 FERD3LQ96RJ6 166 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 NTMT1Q9BV86 223 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ASPNQ9BXN1 380 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC12A9Q9BXP2 914 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CARS2Q9HA77 564 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ACOT13Q9NPJ3 140 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 RPRD1BQ9NQG5 326 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 FBXW2Q9UKT8 454 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF510Q9Y2H8 683 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 PCDHGA10Q9Y5H3 936 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 LEFTY2O00292 366 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 AOC2O75106 756 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 POP7O75817 140 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 PDE9AO76083 593 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CDRT1O95170 752 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 EIF2S1P05198 315 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 PIM1P11309 404 aaPredicted RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 HLA-EP13747 358 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TYRP14679 529 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 AMD1P17707 334 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 NR4A2P43354 598 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ISL1P61371 349 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TUBA1BP68363 451 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF763Q0D2J5 394 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SOWAHCQ53LP3 525 aaPredicted RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CRB2Q5IJ48 1285 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 DDI2Q5TDH0 399 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CXorf57Q6NSI4 855 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF730Q6ZMV8 503 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TUBA1AQ71U36 451 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 KRT74Q7RTS7 529 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 VRK3Q8IV63 474 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 OXR1Q8N573 874 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CHPT1Q8WUD6 406 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CIDECQ96AQ7 238 aaPredicted RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CEP295NLQ96MC4 621 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC38A2Q96QD8 506 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 ZIC5Q96T25 663 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 AIF1LQ9BQI0 150 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 CCM2Q9BSQ5 444 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TRMT61BQ9BVS5 477 aaKnown RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC6A13Q9NSD5 602 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TAS2R16Q9NYV7 291 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TAC3Q9UHF0 121 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 WDR37Q9Y2I8 494 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TMEM98Q9Y2Y6 226 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 COL11A1P12107 1806 aaPredicted RBP6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 PTPRFP10586 1907 aa6.61□□□□□ -1.35
SYNPO2-206ENST00000610556 TMEM88BA6NKF7 163 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms