RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 ZNF490Q9ULM2 529 aaPredicted RBP7.13□□□□□ -1.27
CUX2P1-201ENST00000606426 PCDHGA6Q9Y5G7 932 aa7.13□□□□□ -1.27
CUX2P1-201ENST00000606426 SERTM1A2A2V5 107 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 LRIT2A6NDA9 550 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 SYNDIG1LA6NDD5 238 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 PCDH17O14917 1159 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 P2RX6O15547 441 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 KLK10O43240 276 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 TLX3O43711 291 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 PRAMEF4O60810 478 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 SASH3O75995 380 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 SEMA3DO95025 777 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CAPNS1P04632 268 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 SERPINE1P05121 402 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CYC1P08574 325 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 UROSP10746 265 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 ALOX12P18054 663 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 TCN2P20062 427 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 FBLP22087 321 aaKnown RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 RAP1GDS1P52306 607 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 OCA2Q04671 838 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CSTF3Q12996 717 aaKnown RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CLN3Q13286 438 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 DDX39BQ13838 428 aaKnown RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 DSG2Q14126 1118 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 NKAIN1Q4KMZ8 207 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 TTMPQ5BVD1 217 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 TOR1AIP1Q5JTV8 583 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 DEPDC1Q5TB30 811 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 ARHGAP40Q5TG30 622 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 PRAMEF17Q5VTA0 474 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 PRAMEF9Q5VWM5 478 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 KHDRBS2Q5VWX1 349 aaKnown RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 ZNF385CQ66K41 422 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 LETMD1Q6P1Q0 360 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CUZD1Q86UP6 607 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CLYBLQ8N0X4 340 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 ARHGEF39Q8N4T4 335 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 ARFGAP2Q8N6H7 521 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 ZSCAN1Q8NBB4 408 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 SLC38A9Q8NBW4 561 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 KCT2Q8NC54 265 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 OR2L5Q8NG80 312 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 WDR20Q8TBZ3 569 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 METTL6Q8TCB7 284 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 ADAMTS18Q8TE60 1221 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 UTP15Q8TED0 518 aaKnown RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 SELENOMQ8WWX9 145 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 NACC2Q96BF6 587 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 ARL8AQ96BM9 186 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 MS4A6EQ96DS6 147 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 MMABQ96EY8 250 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 VPS50Q96JG6 964 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 C10orf90Q96M02 699 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CDK15Q96Q40 435 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CCNL2Q96S94 520 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CCT7Q99832 543 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 PAIP2Q9BPZ3 127 aaKnown RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 TBCDQ9BTW9 1192 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 NPLQ9BXD5 320 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 MS4A8Q9BY19 250 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 SLC26A1Q9H2B4 701 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 WDR54Q9H977 334 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 COPS7BQ9H9Q2 264 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 GPN2Q9H9Y4 310 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 MID1IP1Q9NPA3 183 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 MKKSQ9NPJ1 570 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 ZNF282Q9UDV7 671 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 CROTQ9UKG9 612 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 RNF11Q9Y3C5 154 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 MAP4K5Q9Y4K4 846 aa7.12□□□□□ -1.27
CUX2P1-201ENST00000606426 PCM1Q15154 2024 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 A0A087WV48 116 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 A0A0A6YYC8 382 aaPredicted RBP7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 BLACEA4D250 179 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 I3L1I5 382 aaPredicted RBP7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 AZIN1O14977 448 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 ERI3O43414 337 aaKnown RBP7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 FOXS1O43638 330 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 GALR3O60755 368 aaPredicted RBP7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 KLHL18O94889 574 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 OR4F21O95013 312 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 HSPA4LO95757 839 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 IGHEP01854 428 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 CAPN1P07384 714 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 CTSBP07858 339 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 FGF4P08620 206 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 ZNF888P0CJ79 500 aaPredicted RBP7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 SMIM10L1P0DMW3 83 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 TSPAN8P19075 237 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 PTPN4P29074 926 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 DLSTP36957 453 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 MTTPP55157 894 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 ABCE1P61221 599 aaKnown RBP7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 PPP2R2AP63151 447 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 HYAL2Q12891 473 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 STX3Q13277 289 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 DNASE1L3Q13609 305 aa7.11□□□□□ -1.27
CUX2P1-201ENST00000606426 NCF4Q15080 339 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms