RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PQLC2LA1A4F0 135 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 OR6C70A6NIJ9 312 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 F8VP50 259 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 H0Y8G0 127 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 HAS3O00219 553 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF208O43345 1280 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 RNF13O43567 381 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 PLRG1O43660 514 aaKnown RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 KLK8O60259 260 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MOCS3O95396 460 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CSF2P04141 144 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CD3GP09693 182 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 RD3LP0DJH9 198 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 B4GALT1P15291 398 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CASRP41180 1078 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 GSTM5P46439 218 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 UFM1P61960 85 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ATP2C1P98194 919 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 SOX4Q06945 474 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 DSC1Q08554 894 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MGAT3Q09327 533 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 OLIG2Q13516 323 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 KIZQ2M2Z5 673 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 XKR4Q5GH76 650 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CYB5R2Q6BCY4 276 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 C3orf33Q6P1S2 294 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM65Q6PI78 240 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 KIAA1324Q6UXG2 1013 aaKnown RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF767PQ75MW2 155 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 LRRC70Q7Z2Q7 622 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 UBASH3BQ8TF42 649 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 GDPD5Q8WTR4 605 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CYB5D2Q8WUJ1 264 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 HMGB4Q8WW32 186 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 HSD17B8Q92506 261 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MARS2Q96GW9 593 aaKnown RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MS4A14Q96JA4 679 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 KLHL15Q96M94 604 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 SIGLEC11Q96RL6 698 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 CHID1Q9BWS9 393 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ADGRE3Q9BY15 652 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 PITPNM3Q9BZ71 974 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 RPF2Q9H7B2 306 aaKnown RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MED20Q9H944 212 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 NHEJ1Q9H9Q4 299 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 HMG20AQ9NP66 347 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 ACOXLQ9NUZ1 547 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MS4A12Q9NXJ0 267 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 MTMR4Q9NYA4 1195 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC25A10Q9UBX3 287 aaPredicted RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 LRWD1Q9UFC0 647 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 DBR1Q9UK59 544 aaKnown RBP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 NIP7Q9Y221 180 aaKnown RBP eCLIP4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 PLEKHA6Q9Y2H5 1048 aa4.84□□□□□ -1.63
SPTBN1-206ENST00000602898 FRMPD4Q14CM0 1322 aa4.84□□□□□ -1.64
SPTBN1-206ENST00000602898 CENPXA8MT69 81 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CLDN25C9JDP6 229 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 H3BMM5 538 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PPM1DO15297 605 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CHADO15335 359 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 COCHO43405 550 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 USP12O75317 370 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 RFPL2O75678 378 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 IPO13O94829 963 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 HOXD4P09016 255 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 OR52Z1P0C646 297 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 C8orf89P0DMQ9 161 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TYRP14679 529 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 EDN2P20800 178 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MYF6P23409 242 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 DGKAP23743 735 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 DCKP27707 260 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SPAM1P38567 509 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CEBPDP49716 269 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 P2RY4P51582 365 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ATP5J2P56134 94 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 HNRNPKP61978 463 aaKnown RBP eCLIP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 BDH1Q02338 343 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PMS2P3Q13401 168 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 GCKRQ14397 625 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ASTE1Q2TB18 679 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PRAMEF19Q5SWL8 479 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF470Q6ECI4 717 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PODNL1Q6PEZ8 512 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ZC3H14Q6PJT7 736 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 KYAT3Q6YP21 454 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 C20orf204Q6ZNR8 217 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CYFIP1Q7L576 1253 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 S100A7AQ86SG5 101 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM126BQ8IUX1 230 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC37A3Q8NCC5 494 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 OR52H1Q8NGJ2 320 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 OR5M1Q8NGP8 315 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 HM13Q8TCT9 377 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 C10orf82Q8WW14 230 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 S100ZQ8WXG8 99 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PHYHIPQ92561 330 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ESR2Q92731 530 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 AP2M1Q96CW1 435 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 NSL1Q96IY1 281 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms