RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 BRF2Q9HAW0 419 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 FANCEQ9HB96 536 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ACSS2Q9NR19 701 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ZDHHC2Q9UIJ5 367 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 SPTAN1Q13813 2472 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 FEZF1A0PJY2 475 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 SLCO1B7G3V0H7 640 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 H0YGG7 62 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 OR1F1O43749 312 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 NRP2O60462 931 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ULK1O75385 1050 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 LYPLA1O75608 230 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 FGF5P12034 268 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 FOLR1P15328 257 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 WT1P19544 449 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 GCGRP47871 477 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 SEPHS1P49903 392 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 RPL14P50914 215 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 RAB15P59190 212 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ARF3P61204 181 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 PHEXP78562 749 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 MC2RQ01718 297 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 IFT88Q13099 833 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 PRTGQ2VWP7 1150 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ADPRMQ3LIE5 342 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 GARNL3Q5VVW2 1013 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 TLDC1Q6P9B6 456 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 PRICKLE2Q7Z3G6 844 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 TRIM46Q7Z4K8 759 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 VN1R5Q7Z5H4 357 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ASPGQ86U10 573 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ARHGEF39Q8N4T4 335 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 AFAP1L2Q8N4X5 818 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ZNF655Q8N720 491 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 CDYL2Q8N8U2 506 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 GBP7Q8N8V2 638 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 RCBTB1Q8NDN9 531 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 HUS1BQ8NHY5 278 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 WDR36Q8NI36 951 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ZNF473Q8WTR7 871 aaKnown RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 STON2Q8WXE9 905 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 RERGQ96A58 199 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ZNF501Q96CX3 271 aaPredicted RBP11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ZPBPQ9BS86 351 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 ELOVL6Q9H5J4 265 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 TNFRSF12AQ9NP84 129 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 PFDN4Q9NQP4 134 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 FGF21Q9NSA1 209 aa11.1□□□□□ -0.63
CHMP2A-207ENST00000600804 FER1L5A0AVI2 2057 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 A0A0J9YVX5 310 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 ANKDD1BA6NHY2 528 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 A8MU76 341 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 MANBAO00462 879 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 SEMA3DO95025 777 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 TGDSO95455 350 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 TBX6O95947 436 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 CHEK2O96017 543 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 SLC35G6P0C7Q6 338 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 PRPH2P23942 346 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 HMOX2P30519 316 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 ARL1P40616 181 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 FOXA1P55317 472 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 ITGA1P56199 1179 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 MEF2AQ02078 507 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 GUCY1A3Q02108 690 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 RGS1Q08116 209 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 NFATC3Q12968 1075 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 CSTF3Q12996 717 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 CUL3Q13618 768 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 RBBP5Q15291 538 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 TMEM35AQ53FP2 167 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 SH2D4BQ5SQS7 431 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 FRMPD2BQ6IN97 320 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 NIPAL1Q6NVV3 410 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 RAB11FIP2Q7L804 512 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 MYLK4Q86YV6 388 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 CRLF3Q8IUI8 442 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 PLD3Q8IV08 490 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 LRRC34Q8IZ02 419 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 ZNF781Q8N8C0 355 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 PIWIL2Q8TC59 973 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 SLC13A3Q8WWT9 602 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 EXTL1Q92935 676 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 ZNF317Q96PQ6 595 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 TEFMQ96QE5 360 aaKnown RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 CCNL2Q96S94 520 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 MS4A8Q9BY19 250 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 NLNQ9BYT8 704 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 SLC6A16Q9GZN6 736 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 KLHL25Q9H0H3 589 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 ZNF395Q9H8N7 513 aaPredicted RBP11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 SYNPO2LQ9H987 977 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 DMRT3Q9NQL9 472 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 NMRK1Q9NWW6 199 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 VTI1BQ9UEU0 232 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 SERTAD3Q9UJW9 196 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 LOXL2Q9Y4K0 774 aa11.09□□□□□ -0.63
CHMP2A-207ENST00000600804 PCDHGA3Q9Y5H0 932 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms