RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 SARGQ9BW04 601 aa16.21■□□□□ 0.19
LTBP4-209ENST00000594116 TRIM55Q9BYV6 548 aa16.21■□□□□ 0.19
LTBP4-209ENST00000594116 ZNF225Q9UK10 706 aa16.21■□□□□ 0.19
LTBP4-209ENST00000594116 SNX7Q9UNH6 387 aa16.21■□□□□ 0.19
LTBP4-209ENST00000594116 KLHL20Q9Y2M5 609 aa16.21■□□□□ 0.19
LTBP4-209ENST00000594116 SPTAN1Q13813 2472 aaKnown RBP16.21■□□□□ 0.18
LTBP4-209ENST00000594116 TNRC6AQ8NDV7 1962 aaKnown RBP16.2■□□□□ 0.18
LTBP4-209ENST00000594116 KCNE1BA0A087WTH5 132 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 A0A1B0GTL3 188 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 CLEC18AA5D8T8 446 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 CYSRT1A8MQ03 144 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 H7BY64 318 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 MEN1O00255 615 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 UBFD1O14562 309 aaKnown RBP16.2■□□□□ 0.18
LTBP4-209ENST00000594116 DNAJB5O75953 348 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 RAB40ALP0C0E4 278 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 NEFHP12036 1026 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 CD22P20273 847 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 VARSP26640 1264 aaKnown RBP16.2■□□□□ 0.18
LTBP4-209ENST00000594116 RORAP35398 523 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 CCR8P51685 355 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 CCNG1P51959 295 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 PKNOX1P55347 436 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 BST1Q10588 318 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 DOC2AQ14183 400 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 RBBP7Q16576 425 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 XKR6Q5GH73 641 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 LIPJQ5W064 366 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 GRHL2Q6ISB3 625 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 CLEC18BQ6UXF7 455 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 CLEC18CQ8NCF0 446 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 MIB2Q96AX9 1013 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 MAGEB10Q96LZ2 347 aaPredicted RBP16.2■□□□□ 0.18
LTBP4-209ENST00000594116 PRAP1Q96NZ9 151 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 EFCAB11Q9BUY7 163 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 CHST8Q9H2A9 424 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 SPNS1Q9H2V7 528 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 MANSC1Q9H8J5 431 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 TRPS1Q9UHF7 1281 aa16.2■□□□□ 0.18
LTBP4-209ENST00000594116 PCDHGA9Q9Y5G4 932 aaKnown RBP16.2■□□□□ 0.18
LTBP4-209ENST00000594116 MDC1Q14676 2089 aaKnown RBP16.19■□□□□ 0.18
LTBP4-209ENST00000594116 TMEM150CB9EJG8 249 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 MAP3K7O43318 606 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 NRP2O60462 931 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 SNNO75324 88 aaPredicted RBP16.19■□□□□ 0.18
LTBP4-209ENST00000594116 SNUPNO95149 360 aaKnown RBP16.19■□□□□ 0.18
LTBP4-209ENST00000594116 CLDN9O95484 217 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 ESRRBO95718 433 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 PDGFAP04085 211 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 CHRNGP07510 517 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 HNF4AP41235 474 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 GABRA4P48169 554 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 CD97P48960 835 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 ABCE1P61221 599 aaKnown RBP16.19■□□□□ 0.18
LTBP4-209ENST00000594116 STX3Q13277 289 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 LAPTM5Q13571 262 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 UBAP2LQ14157 1087 aaKnown RBP16.19■□□□□ 0.18
LTBP4-209ENST00000594116 ARL13AQ5H913 290 aaPredicted RBP16.19■□□□□ 0.18
LTBP4-209ENST00000594116 PRAMEF17Q5VTA0 474 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 ATG16L1Q676U5 607 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 LETMD1Q6P1Q0 360 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 RGS9BPQ6ZS82 235 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 GPRIN3Q6ZVF9 776 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 RNF44Q7L0R7 432 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 OR4F6Q8NGB9 312 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 OR1L3Q8NH93 324 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 ADAMTS17Q8TE56 1095 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 DYDC1Q8WWB3 177 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 ZNF75CPQ92670 426 aaPredicted RBP16.19■□□□□ 0.18
LTBP4-209ENST00000594116 ATP6V1E2Q96A05 226 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 CLIP3Q96DZ5 547 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 TCTN2Q96GX1 697 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 MAGEB18Q96M61 343 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 AIF1LQ9BQI0 150 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 NLNQ9BYT8 704 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 PITHD1Q9GZP4 211 aaPredicted RBP16.19■□□□□ 0.18
LTBP4-209ENST00000594116 KLHL25Q9H0H3 589 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 NT5DC2Q9H857 520 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 ACTR8Q9H981 624 aa16.19■□□□□ 0.18
LTBP4-209ENST00000594116 FER1L5A0AVI2 2057 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 TRBC2A0A5B9 178 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 HAT1O14929 419 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 ITM2AO43736 263 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 CTSVO60911 334 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 EZRP15311 586 aaKnown RBP16.18■□□□□ 0.18
LTBP4-209ENST00000594116 SLC1A6P48664 564 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 SLBPQ14493 270 aaKnown RBP eCLIP16.18■□□□□ 0.18
LTBP4-209ENST00000594116 PAGE2BQ5JRK9 111 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 CPZQ66K79 652 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 LCN10Q6JVE6 187 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 MILR1Q7Z6M3 343 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 CUZD1Q86UP6 607 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 ENDOVQ8N8Q3 282 aaKnown RBP16.18■□□□□ 0.18
LTBP4-209ENST00000594116 CDK15Q96Q40 435 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 SORT1Q99523 831 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 DPH2Q9BQC3 489 aaPredicted RBP16.18■□□□□ 0.18
LTBP4-209ENST00000594116 C20orf27Q9GZN8 174 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 ING2Q9H160 280 aa16.18■□□□□ 0.18
LTBP4-209ENST00000594116 ACTR5Q9H9F9 607 aaPredicted RBP16.18■□□□□ 0.18
LTBP4-209ENST00000594116 EML4Q9HC35 981 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms