RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 VPS39Q96JC1 886 aa11.92□□□□□ -0.5
RFX1-207ENST00000589937 PDLIM2Q96JY6 352 aa11.92□□□□□ -0.5
RFX1-207ENST00000589937 MOCS1Q9NZB8 636 aa11.92□□□□□ -0.5
RFX1-207ENST00000589937 SLC22A14Q9Y267 594 aa11.92□□□□□ -0.5
RFX1-207ENST00000589937 MTO1Q9Y2Z2 717 aaKnown RBP11.92□□□□□ -0.5
RFX1-207ENST00000589937 SLC22A7Q9Y694 548 aa11.92□□□□□ -0.5
RFX1-207ENST00000589937 CACNA1CQ13936 2221 aa11.92□□□□□ -0.5
RFX1-207ENST00000589937 GTF3C1Q12789 2109 aa11.92□□□□□ -0.5
RFX1-207ENST00000589937 NCOA6Q14686 2063 aaPredicted RBP11.91□□□□□ -0.5
RFX1-207ENST00000589937 OR5H15A6NDH6 313 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 PABPN1LA6NDY0 278 aaKnown RBP11.91□□□□□ -0.5
RFX1-207ENST00000589937 FAM227AF5H4B4 570 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 PCDH17O14917 1159 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 PHGDHO43175 533 aaKnown RBP11.91□□□□□ -0.5
RFX1-207ENST00000589937 ZNHIT1O43257 154 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 RAD51CO43502 376 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 CHST10O43529 356 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 PRAMEF4O60810 478 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 PRAMEF2O60811 474 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 B4GALT2O60909 372 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 WISP3O95389 354 aaPredicted RBP11.91□□□□□ -0.5
RFX1-207ENST00000589937 FHP07954 510 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 ENO2P09104 434 aaPredicted RBP11.91□□□□□ -0.5
RFX1-207ENST00000589937 ALOX12P18054 663 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 MAOAP21397 527 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 SSTR1P30872 391 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 CSHL1Q14406 222 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 USP10Q14694 798 aaKnown RBP11.91□□□□□ -0.5
RFX1-207ENST00000589937 NSDHLQ15738 373 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 TOR1AIP1Q5JTV8 583 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 PRAMEF9Q5VWM5 478 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 RPUSD3Q6P087 351 aaKnown RBP11.91□□□□□ -0.5
RFX1-207ENST00000589937 NT5CQ8TCD5 201 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 EGFL8Q99944 293 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 TMEM79Q9BSE2 394 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 SARGQ9BW04 601 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 SLC6A16Q9GZN6 736 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 TSPAN10Q9H1Z9 355 aaPredicted RBP11.91□□□□□ -0.5
RFX1-207ENST00000589937 RHBGQ9H310 441 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 KCNK13Q9HB14 408 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 SAYSD1Q9NPB0 183 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 KLHL1Q9NR64 748 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 GRHL1Q9NZI5 618 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 C19orf25Q9UFG5 118 aaPredicted RBP11.91□□□□□ -0.5
RFX1-207ENST00000589937 SH3BGRL2Q9UJC5 107 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 ZFP69BQ9UJL9 534 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 DYRK1BQ9Y463 629 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 OARD1Q9Y530 152 aa11.91□□□□□ -0.5
RFX1-207ENST00000589937 ABCA12Q86UK0 2595 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 MYO9AB2RTY4 2548 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 CCDC188H7C350 402 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 WDR47O94967 919 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 C1QAP02745 245 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 HNRNPH1P31943 449 aaKnown RBP11.9□□□□□ -0.5
RFX1-207ENST00000589937 FBN2P35556 2912 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 SLC6A12P48065 614 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 HNRNPFP52597 415 aaKnown RBP11.9□□□□□ -0.5
RFX1-207ENST00000589937 OR4D2P58180 307 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 TUBA3CQ13748 450 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 EFTUD2Q15029 972 aaKnown RBP eCLIP11.9□□□□□ -0.5
RFX1-207ENST00000589937 HERC3Q15034 1050 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 RBBP5Q15291 538 aaKnown RBP11.9□□□□□ -0.5
RFX1-207ENST00000589937 OR4D1Q15615 310 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 TRADDQ15628 312 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 ACER2Q5QJU3 275 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 ZNF468Q5VIY5 522 aaPredicted RBP11.9□□□□□ -0.5
RFX1-207ENST00000589937 TUBA3EQ6PEY2 450 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 NXPE4Q6UWF7 544 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 MDS2Q8NDY4 140 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 CREB3L4Q8TEY5 395 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 SREK1Q8WXA9 508 aaKnown RBP11.9□□□□□ -0.5
RFX1-207ENST00000589937 ATL1Q8WXF7 558 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 ESAMQ96AP7 390 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 TBC1D20Q96BZ9 403 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 PDLIM5Q96HC4 596 aaKnown RBP11.9□□□□□ -0.5
RFX1-207ENST00000589937 RUNDC3BQ96NL0 473 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 TRIM54Q9BYV2 358 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 RNF32Q9H0A6 362 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 RHOJQ9H4E5 214 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 PELI2Q9HAT8 420 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 GPAMQ9HCL2 828 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 STMN3Q9NZ72 180 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 ASB1Q9Y576 335 aa11.9□□□□□ -0.5
RFX1-207ENST00000589937 A8MUA0 341 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 MAGEB17A8MXT2 336 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 TGFBR3LH3BV60 316 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 TAPBPO15533 448 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 FAM155BO75949 473 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 UNC5CO95185 931 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 TBX6O95947 436 aaPredicted RBP11.89□□□□□ -0.51
RFX1-207ENST00000589937 PPP2R1BP30154 601 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 AGTR2P50052 363 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 SLC26A5P58743 744 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 GPX6P59796 221 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 RGS1Q08116 209 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 PWP1Q13610 501 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 SLBPQ14493 270 aaKnown RBP eCLIP11.89□□□□□ -0.51
RFX1-207ENST00000589937 INAQ16352 499 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 ZNF766Q5HY98 468 aa11.89□□□□□ -0.51
RFX1-207ENST00000589937 H3F3CQ6NXT2 135 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms