RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 TMEM98Q9Y2Y6 226 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 PCDHGB3Q9Y5G1 929 aa18.39■□□□□ 0.53
PRKCSH-209ENST00000589838 TRIM64BA6NI03 449 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 MYOGP15173 224 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 DDX5P17844 614 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 IL12RB1P42701 662 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 CXCR4P61073 352 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 CTBSQ01459 385 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 CDK5R2Q13319 367 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 C16orf72Q14CZ0 275 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 GCNT6Q5T4J0 391 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 XAF1Q6GPH4 301 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 ANGPTL8Q6UXH0 198 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 FAM83HQ6ZRV2 1179 aaPredicted RBP18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 C17orf64Q86WR6 236 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 OXR1Q8N573 874 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 NATD1Q8N6N6 113 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 PCBD2Q9H0N5 130 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 PADI2Q9Y2J8 665 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 TPRKBQ9Y3C4 175 aa18.38■□□□□ 0.53
PRKCSH-209ENST00000589838 M0QX08 132 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 ATE1O95260 518 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 KRT75O95678 551 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 C6orf47O95873 294 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 KLK1P06870 262 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 NUDT7P0C024 238 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 SERPINB1P30740 379 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 TAS2R50P59544 299 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 SELENOWP63302 87 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 HBA1P69905 142 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 DUSP6Q16828 381 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 NUDT18Q6ZVK8 323 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 GALNT5Q7Z7M9 940 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 GALNT10Q86SR1 603 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 OR4K1Q8NGD4 311 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 RAB2BQ8WUD1 216 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 GAB3Q8WWW8 586 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 LZICQ8WZA0 190 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 THAP11Q96EK4 314 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 C7orf34Q96L11 122 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 NODALQ96S42 347 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 RUBCNLQ9H714 662 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 LTB4R2Q9NPC1 389 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 KRT84Q9NSB2 600 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 SCN3BQ9NY72 215 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 TAS2R9Q9NYW1 312 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 GMPPBQ9Y5P6 360 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 C2orf16Q68DN1 1984 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 MITFO75030 526 aaPredicted RBP18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 ANGPTL1O95841 491 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 IFNA14P01570 189 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 PRIM2P49643 509 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 KCNJ10P78508 379 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 HPCAP84074 193 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 IL1RL1Q01638 556 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 MEF2AQ02078 507 aaPredicted RBP18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 RAPSNQ13702 412 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 PIP5KL1Q5T9C9 394 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 HEATR4Q86WZ0 1026 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 FAM129CQ86XR2 697 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 ZC3H7AQ8IWR0 971 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 SLC30A8Q8IWU4 369 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 TTC29Q8NA56 475 aaPredicted RBP18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 ATG16L2Q8NAA4 619 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 PLA2G15Q8NCC3 412 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 OR5AR1Q8NGP9 310 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 ZNF347Q96SE7 839 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 AIF1LQ9BQI0 150 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 RHBGQ9H310 441 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 TMEM38AQ9H6F2 299 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 THUMPD1Q9NXG2 353 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 TDRKHQ9Y2W6 561 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 NAALAD2Q9Y3Q0 740 aa18.37■□□□□ 0.53
PRKCSH-209ENST00000589838 A0A1W2PRB8 838 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 ANKDD1BA6NHY2 528 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 GPR89AB7ZAQ6 455 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 SAP18O00422 153 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 TNFRSF21O75509 655 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 SEMA3DO95025 777 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 DIRAS1O95057 198 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 GPR89BP0CG08 455 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 ERGP11308 486 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 CCNA2P20248 432 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 CHI3L1P36222 383 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 OPRD1P41143 372 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 CDK3Q00526 305 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 RUNX3Q13761 415 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 METRNLQ641Q3 311 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 FAHD1Q6P587 224 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 TSPYL5Q86VY4 417 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 CROCCP3Q8IVE0 287 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.36■□□□□ 0.532e-8■■□□□ 11.7
PRKCSH-209ENST00000589838 BPIFB6Q8NFQ5 453 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 OR5K2Q8NHB8 316 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 BARD1Q99728 777 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 DCUN1D5Q9BTE7 237 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 PITHD1Q9GZP4 211 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 LHPPQ9H008 270 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 SPNS1Q9H2V7 528 aa18.36■□□□□ 0.53
PRKCSH-209ENST00000589838 SPATA7Q9P0W8 599 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms