RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 CLMPQ9H6B4 373 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 XAB2Q9HCS7 855 aaKnown RBP7.89□□□□□ -1.15
DNMT1-219ENST00000589349 FAM60AQ9NP50 221 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 FBXO6Q9NRD1 293 aaPredicted RBP7.89□□□□□ -1.15
DNMT1-219ENST00000589349 TREX1Q9NSU2 369 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 SEMA5BQ9P283 1151 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 DHCR7Q9UBM7 475 aaKnown RBP7.89□□□□□ -1.15
DNMT1-219ENST00000589349 PLCL2Q9UPR0 1127 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 TP53TG5Q9Y2B4 290 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 PTRH2Q9Y3E5 179 aaKnown RBP7.89□□□□□ -1.15
DNMT1-219ENST00000589349 NFS1Q9Y697 457 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 AP1M2Q9Y6Q5 423 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 BPTFQ12830 3046 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 NBEAQ8NFP9 2946 aa7.89□□□□□ -1.15
DNMT1-219ENST00000589349 RASGRF2O14827 1237 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 PHF2O75151 1096 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 USP1O94782 785 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 CATP04040 527 aaKnown RBP7.88□□□□□ -1.15
DNMT1-219ENST00000589349 ZNF888P0CJ79 500 aaPredicted RBP7.88□□□□□ -1.15
DNMT1-219ENST00000589349 PKMP14618 531 aaKnown RBP7.88□□□□□ -1.15
DNMT1-219ENST00000589349 PKLRP30613 574 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 FOLR3P41439 243 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 VSX2P58304 361 aaPredicted RBP7.88□□□□□ -1.15
DNMT1-219ENST00000589349 DCDP81605 110 aaKnown RBP7.88□□□□□ -1.15
DNMT1-219ENST00000589349 ACVR1Q04771 509 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 CUL1Q13616 776 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 IL10RAQ13651 578 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 KCNJ11Q14654 390 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 UGT8Q16880 541 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 LONRF1Q17RB8 773 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 SLC5A12Q1EHB4 618 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 KLHL38Q2WGJ6 581 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 ANKRD20A4Q4UJ75 823 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 TLDC1Q6P9B6 456 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 FIGLAQ6QHK4 219 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 RAB43Q86YS6 212 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 METTL27Q8N6F8 245 aaPredicted RBP7.88□□□□□ -1.15
DNMT1-219ENST00000589349 CHTF18Q8WVB6 975 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 CFAP36Q96G28 342 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 SELENOSQ9BQE4 189 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 NLNQ9BYT8 704 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 PITPNM3Q9BZ71 974 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 TRIM31Q9BZY9 425 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 DDX47Q9H0S4 455 aaKnown RBP7.88□□□□□ -1.15
DNMT1-219ENST00000589349 ING2Q9H160 280 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 SEC61A2Q9H9S3 476 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 MRM3Q9HC36 420 aaKnown RBP7.88□□□□□ -1.15
DNMT1-219ENST00000589349 FAM114A2Q9NRY5 505 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 IARS2Q9NSE4 1012 aaKnown RBP7.88□□□□□ -1.15
DNMT1-219ENST00000589349 EURLQ9NYK6 297 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 TUBD1Q9UJT1 453 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 SNX12Q9UMY4 172 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 COMMD10Q9Y6G5 202 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 FAM169AQ9Y6X4 670 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 IGSF10Q6WRI0 2623 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 ITPR1Q14643 2758 aa7.88□□□□□ -1.15
DNMT1-219ENST00000589349 A0A0J9YVX5 310 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 FAM237BA0A1B0GVD1 139 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 KRT87PA6NCN2 255 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 NPEPPSL1A6NEC2 478 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 SUV39H1O43463 412 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 GPC4O75487 556 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 TMEM63AO94886 807 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 SLCO2B1O94956 709 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 C1orf105O95561 183 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 CBSLP0DN79 551 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 PIM1P11309 404 aaPredicted RBP7.87□□□□□ -1.15
DNMT1-219ENST00000589349 OGNP20774 298 aaKnown RBP7.87□□□□□ -1.15
DNMT1-219ENST00000589349 SAT1P21673 171 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 RPS3P23396 243 aaKnown RBP eCLIP7.87□□□□□ -1.15
DNMT1-219ENST00000589349 PSMA3P25788 255 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 CD40P25942 277 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 PSMB5P28074 263 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 CMPK1P30085 196 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 CBSP35520 551 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 PAFAH1B1P43034 410 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 MEOX1P50221 254 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 PMS2P54278 862 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 RRADP55042 308 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 KLRB1Q12918 225 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 PTK6Q13882 451 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 NCF4Q15080 339 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 ZIC1Q15915 447 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 IGFBP7Q16270 282 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 CYP2A13Q16696 494 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 CCSMST1Q4G0I0 132 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 ZNF658BQ4V348 819 aaPredicted RBP7.87□□□□□ -1.15
DNMT1-219ENST00000589349 HSP90AA5PQ58FG0 334 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 ACSBG2Q5FVE4 666 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 CTSL3PQ5NE16 218 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 IRAK1BP1Q5VVH5 260 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 PRAMEF9Q5VWM5 478 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 IZUMO3Q5VZ72 239 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 KIAA0930Q6ICG6 404 aaPredicted RBP7.87□□□□□ -1.15
DNMT1-219ENST00000589349 SUSD1Q6UWL2 747 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 SHISA6Q6ZSJ9 500 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 PCGF5Q86SE9 256 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 CAND1Q86VP6 1230 aaKnown RBP7.87□□□□□ -1.15
DNMT1-219ENST00000589349 DENND6AQ8IWF6 608 aa7.87□□□□□ -1.15
DNMT1-219ENST00000589349 PRSS58Q8IYP2 241 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms