RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 FAM136AQ96C01 138 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 CXorf40BQ96DE9 158 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 PTCD3Q96EY7 689 aaKnown RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 EGFL8Q99944 293 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 EBF4Q9BQW3 602 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 NUDT9Q9BW91 350 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 CCDC106Q9BWC9 280 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 NUF2Q9BZD4 464 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 UNKQ9C0B0 810 aaKnown RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 CHST8Q9H2A9 424 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 ZNF395Q9H8N7 513 aaPredicted RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 RMI1Q9H9A7 625 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 TRIM39Q9HCM9 518 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 MID1IP1Q9NPA3 183 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 ACSS2Q9NR19 701 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 FGF21Q9NSA1 209 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 RIC8BQ9NVN3 520 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 WWOXQ9NZC7 414 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 OPTCQ9UBM4 332 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 ZDHHC2Q9UIJ5 367 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 ERRFI1Q9UJM3 462 aaPredicted RBP7.51□□□□□ -1.21
VMP1-204ENST00000587259 PCTPQ9UKL6 214 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 ANGPTL3Q9Y5C1 460 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 PCDHGA6Q9Y5G7 932 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 HIVEP3Q5T1R4 2406 aa7.51□□□□□ -1.21
VMP1-204ENST00000587259 C17orf113A0A1B0GUU1 675 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 OR5K4A6NMS3 321 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 IQCF5A8MTL0 148 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 E2F3O00716 465 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 KMOO15229 486 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 GPC4O75487 556 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 CDK14O94921 469 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 SLCO2B1O94956 709 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 WDR47O94967 919 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 CBX6O95503 412 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 CATP04040 527 aaKnown RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 RPN2P04844 631 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 PGGT1BP53609 377 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 CTSCP53634 463 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 ITGA1P56199 1179 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 ZNF33BQ06732 778 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 ABRQ12979 859 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 BOP1Q14137 746 aaKnown RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 NFE2L1Q14494 772 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 PDCD2Q16342 344 aaPredicted RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 GSTA3Q16772 222 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 LSM12Q3MHD2 195 aaKnown RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.5□□□□□ -1.21
VMP1-204ENST00000587259 ACSBG2Q5FVE4 666 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 SLC6A19Q695T7 634 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 NXNQ6DKJ4 435 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 C16orf89Q6UX73 402 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 MAVSQ7Z434 540 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 PARP9Q8IXQ6 854 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 FAM9CQ8IZT9 166 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 CLDN19Q8N6F1 224 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 TEX9Q8N6V9 391 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 BEND7Q8N7W2 519 aaPredicted RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 RBMXL3Q8N7X1 1067 aaKnown RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 ENDOVQ8N8Q3 282 aaKnown RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 PHC3Q8NDX5 983 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 CFAP61Q8NHU2 1237 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 RP9Q8TA86 221 aaKnown RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 MCOLN3Q8TDD5 553 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 ELMO1Q92556 727 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 SLC41A2Q96JW4 573 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 LINC00615Q96LM1 132 aaPredicted RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 SLC30A3Q99726 388 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 CCM2Q9BSQ5 444 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 HGH1Q9BTY7 390 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 KLHL25Q9H0H3 589 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 EPB41L1Q9H4G0 881 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 UCK1Q9HA47 277 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 PARVBQ9HBI1 364 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 POT1Q9NUX5 634 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 ARL15Q9NXU5 204 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 RARRES3Q9UL19 164 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 FARSAQ9Y285 508 aaKnown RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 DNMT3AQ9Y6K1 912 aaPredicted RBP7.5□□□□□ -1.21
VMP1-204ENST00000587259 CROCCQ5TZA2 2017 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 CSMD1Q96PZ7 3565 aa7.5□□□□□ -1.21
VMP1-204ENST00000587259 SPTBP11277 2137 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 OR2AG2A6NM03 316 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 BBIP1A8MTZ0 92 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 C21orf140B9A014 251 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 E9PBE3 544 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 J3QL48 77 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 K7EPI3 171 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 SDHDO14521 159 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 UBDO15205 165 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 KLHL41O60662 606 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 UGDHO60701 494 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 KCNJ13O60928 360 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 SCRG1O75711 98 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 CIB2O75838 187 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 WFS1O76024 890 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 IDO1P14902 403 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 EPB42P16452 691 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 IDSP22304 550 aa7.49□□□□□ -1.21
VMP1-204ENST00000587259 EPHA3P29320 983 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms