RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CDK4P11802 303 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 PVRP15151 417 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 PTX3P26022 381 aaPredicted RBP12.09□□□□□ -0.47
VMP1-202ENST00000585847 PIK3R1P27986 724 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 AHRP35869 848 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 ASMTP46597 345 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 HNRNPH2P55795 449 aaKnown RBP12.09□□□□□ -0.47
VMP1-202ENST00000585847 CYLC2Q14093 348 aaPredicted RBP12.09□□□□□ -0.47
VMP1-202ENST00000585847 SLBPQ14493 270 aaKnown RBP eCLIP12.09□□□□□ -0.47
VMP1-202ENST00000585847 ABRAXAS2Q15018 415 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 ZIC1Q15915 447 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 AP5B1Q2VPB7 878 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 TMEM35AQ53FP2 167 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 KIAA1614Q5VZ46 1190 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 IRGCQ6NXR0 463 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 HACD2Q6Y1H2 254 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 RBM44Q6ZP01 1051 aaKnown RBP12.09□□□□□ -0.47
VMP1-202ENST00000585847 Q6ZSR9 355 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 FAM92BQ6ZTR7 304 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 MSANTD1Q6ZTZ1 278 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 CACTIN-AS1Q8N1I8 211 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 DCBLD1Q8N8Z6 715 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 PCYOX1LQ8NBM8 494 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 SRFBP1Q8NEF9 429 aaKnown RBP12.09□□□□□ -0.47
VMP1-202ENST00000585847 TRPV3Q8NET8 790 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 OR7G3Q8NG95 312 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 WDR48Q8TAF3 677 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 KLHL29Q96CT2 875 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 MOCOSQ96EN8 888 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 CCDC74BQ96LY2 380 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 TGM7Q96PF1 710 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 TAC3Q9UHF0 121 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 BTRCQ9Y297 605 aa12.09□□□□□ -0.47
VMP1-202ENST00000585847 IGKV1-8A0A0C4DH67 115 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 A0A1B0GTL3 188 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 GSAPA4D1B5 854 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ISM1B1AKI9 464 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 NRP2O60462 931 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 CLEC3AO75596 197 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 SNRPB2P08579 225 aaKnown RBP12.08□□□□□ -0.48
VMP1-202ENST00000585847 KRT16P08779 473 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ST6GAL1P15907 406 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 CCKBRP32239 447 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ACTN3Q08043 901 aaPredicted RBP12.08□□□□□ -0.48
VMP1-202ENST00000585847 FOXM1Q08050 763 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 TGM3Q08188 693 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ACSM2AQ08AH3 577 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 RCAN2Q14206 197 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 C16orf72Q14CZ0 275 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ISXQ2M1V0 245 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ACSM2BQ68CK6 577 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 C19orf48Q6RUI8 117 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 SPESP1Q6UW49 350 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 C16orf89Q6UX73 402 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 IKBIPQ70UQ0 350 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 TMPRSS7Q7RTY8 843 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 PAGE2Q7Z2X7 111 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 PRSS42Q7Z5A4 293 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 PLXDC1Q8IUK5 500 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 NATD1Q8N6N6 113 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 RCBTB1Q8NDN9 531 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 OR2L3Q8NG85 312 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 KLHL6Q8WZ60 621 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ZUFSPQ96AP4 578 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ROPN1LQ96C74 230 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 CD180Q99467 661 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 DPYSL5Q9BPU6 564 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 BTBD10Q9BSF8 475 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 MRPL1Q9BYD6 325 aaKnown RBP12.08□□□□□ -0.48
VMP1-202ENST00000585847 ACPTQ9BZG2 426 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 CCDC86Q9H6F5 360 aaKnown RBP12.08□□□□□ -0.48
VMP1-202ENST00000585847 EFCAB1Q9HAE3 211 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 SLC6A20Q9NP91 592 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 MRPS30Q9NP92 439 aaKnown RBP12.08□□□□□ -0.48
VMP1-202ENST00000585847 ACSS2Q9NR19 701 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ARMCX1Q9P291 453 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 KLHL3Q9UH77 587 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 ADAM29Q9UKF5 820 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 KLHL20Q9Y2M5 609 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 NDUFAF1Q9Y375 327 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 GPR45Q9Y5Y3 372 aa12.08□□□□□ -0.48
VMP1-202ENST00000585847 FASNP49327 2511 aaKnown RBP12.08□□□□□ -0.48
VMP1-202ENST00000585847 SPTBP11277 2137 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 C15orf38-AP3S2A0A0A6YYH1 394 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ATP6AP2A0A1C7CYW4 349 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 FAM234BA2RU67 622 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 PMS2P1A4D2B8 440 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 FAM149AA5PLN7 773 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 TLCD2A6NGC4 264 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 ANKDD1BA6NHY2 528 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 A8MU76 341 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 TAF4O00268 1085 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 FFAR3O14843 346 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 GYG2O15488 501 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 GPR42O15529 346 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 HCRTR1O43613 425 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 PRAMEF4O60810 478 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 PEX11AO75192 247 aa12.07□□□□□ -0.48
VMP1-202ENST00000585847 CSO75390 466 aaKnown RBP12.07□□□□□ -0.48
VMP1-202ENST00000585847 SLC22A3O75751 556 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms