RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 SCN1BQ07699 218 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ASAH1Q13510 395 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 LAYNQ6UX15 382 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SEZ6L2Q6UXD5 910 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RTL4Q6ZR62 310 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 NUDT18Q6ZVK8 323 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PAQR7Q86WK9 346 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 C12orf45Q8N5I9 185 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 KDF1Q8NAX2 398 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 B3GALNT2Q8NCR0 500 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 QRFPRQ96P65 431 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MAP3K3Q99759 626 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RTP3Q9BQQ7 232 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CACNA2D2Q9NY47 1150 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ING4Q9UNL4 249 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MAB21L2Q9Y586 359 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PCDHA11Q9Y5I1 949 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 XIRP2A4UGR9 3374 aa11.48□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CHD5Q8TDI0 1954 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ANKDD1BA6NHY2 528 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 LGALS8O00214 317 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CACNB4O00305 520 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 GLRA3O75311 464 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ADRB1P08588 477 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ZDHHC11BP0C7U3 371 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RAB3BP20337 219 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MAGEA3P43357 314 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 HNMTP50135 292 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ALDH3A2P51648 485 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ARSFP54793 590 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CASP9P55211 416 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ACTR1AP61163 376 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CRADDP78560 199 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 STX4Q12846 297 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SMAD1Q15797 465 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TMEM132CQ8N3T6 1108 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CPNE4Q96A23 557 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 FAM193BQ96PV7 902 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CRB3Q9BUF7 120 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SNRNP25Q9BV90 132 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 NCOR1P1Q9H4R4 102 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 NDUFAF4Q9P032 175 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MYO7AQ13402 2215 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CDC7O00311 574 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 FABP7O15540 132 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MMP20O60882 483 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ALDOAP04075 364 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 GP1BAP07359 652 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 WARSP23381 471 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 DDX6P26196 483 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PDHA2P29803 388 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CD6P30203 668 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 KCNJ3P48549 501 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 VEGFCP49767 419 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SLC7A2P52569 658 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PRKG2Q13237 762 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TUSC3Q13454 348 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RAPSNQ13702 412 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PAQR9Q6ZVX9 377 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 OR8D4Q8NGM9 314 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 HTATIP2Q9BUP3 242 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 GPR62Q9BZJ7 368 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 GAREM1Q9H706 876 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 CARS2Q9HA77 564 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 VSX1Q9NZR4 365 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MUTYHQ9UIF7 546 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 BTNL2Q9UIR0 455 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TTC3P53804 2025 aa11.47□□□□□ -0.57
CDK5RAP3-232ENST00000584168 WDR27A2RRH5 827 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 H3BM21 787 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TPP1O14773 563 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PPM1DO15297 605 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MRPS14O60783 128 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 SRP72O76094 671 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 WDR47O94967 919 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 IL33O95760 270 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 APOC3P02656 99 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TPH1P17752 444 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ETV5P41161 510 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 HOXC5Q00444 222 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 KCNAB2Q13303 367 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 DAG1Q14118 895 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 IRF4Q15306 451 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TPGS2Q68CL5 300 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TIFABQ6ZNK6 161 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 GPRIN1Q7Z2K8 1008 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PRR18Q8N4B5 295 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MS4A15Q8N5U1 240 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ZNF540Q8NDQ6 660 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 AURKBQ96GD4 344 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 PCED1BQ96HM7 432 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 TRMOQ9BU70 441 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 RIMS4Q9H426 269 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 DMRT1Q9Y5R6 373 aa11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 MYO18AQ92614 2054 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-232ENST00000584168 ZFC3H1O60293 1989 aaKnown RBP11.46□□□□□ -0.58
CDK5RAP3-232ENST00000584168 GPR171O14626 319 aa11.46□□□□□ -0.58
CDK5RAP3-232ENST00000584168 XPNPEP2O43895 674 aa11.46□□□□□ -0.58
CDK5RAP3-232ENST00000584168 MPC2O95563 127 aa11.46□□□□□ -0.58
CDK5RAP3-232ENST00000584168 GPIP06744 558 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms