RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 AGAP11Q8TF27 550 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 C19orf60Q96EN9 201 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 MAELQ96JY0 434 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 FCRL4Q96PJ5 515 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 OR6C1Q96RD1 312 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 TMEM79Q9BSE2 394 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 CCDC106Q9BWC9 280 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 CD244Q9BZW8 370 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 KLHL25Q9H0H3 589 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 C1orf21Q9H246 121 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 SLC6A20Q9NP91 592 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 THSD1Q9NS62 852 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 FGF21Q9NSA1 209 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 TMEM184CQ9NVA4 438 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 OCIAD1Q9NX40 245 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 GPRC5BQ9NZH0 403 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 PCTPQ9UKL6 214 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 RARRES3Q9UL19 164 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 PLCL2Q9UPR0 1127 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 FIS1Q9Y3D6 152 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 PCDHGA7Q9Y5G6 932 aa12.9□□□□□ -0.34
CSNK1D-220ENST00000581737 CAPN14A8MX76 684 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 CDRT15L2A8MXV6 281 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 K7EPI3 171 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 AGRPO00253 132 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 UBDO15205 165 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 TAPBPO15533 448 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 CIB2O75838 187 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 FOLR1P15328 257 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 NPPBP16860 134 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 ITIH1P19827 911 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 HMOX2P30519 316 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 HSPA7P48741 367 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 CCR8P51685 355 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 SH3BP2P78314 561 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 BTKQ06187 659 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 KCNAB1Q14722 419 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 LSM12Q3MHD2 195 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC9B1Q4ZJI4 515 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 COLEC12Q5KU26 742 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 MAVSQ7Z434 540 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 PAQR7Q86WK9 346 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 PPP1R3BQ86XI6 285 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 FAM20CQ8IXL6 584 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 GPR135Q8IZ08 494 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 CPSF7Q8N684 471 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 SNX31Q8N9S9 440 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 ABHD11Q8NFV4 315 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 TRPC4APQ8TEL6 797 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC5A11Q8WWX8 675 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 ZFYVE21Q9BQ24 234 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 SHCBP1LQ9BZQ2 653 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 PELI2Q9HAT8 420 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 SEMA4BQ9NPR2 832 aaPredicted RBP12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 ARL8BQ9NVJ2 186 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 IL17BQ9UHF5 180 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 SERTAD3Q9UJW9 196 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC22A14Q9Y267 594 aa12.89□□□□□ -0.35
CSNK1D-220ENST00000581737 AHCTF1Q8WYP5 2266 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 SDHDO14521 159 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 CLGNO14967 610 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 NVLO15381 856 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 CCNT2O60583 730 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 SIX3O95343 332 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 FGF5P12034 268 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 CDH1P12830 882 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 EPB42P16452 691 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 CD82P27701 267 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 EPHA3P29320 983 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 ETV5P41161 510 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 CCNG1P51959 295 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 ITGA1P56199 1179 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 RPS15AP62244 130 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 GTF2H2Q13888 395 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 GPR19Q15760 415 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 ZIC1Q15915 447 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 ZXDCQ2QGD7 858 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 TCTE1Q5JU00 501 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 FCRL6Q6DN72 434 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 GTF2H2CQ6P1K8 395 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 C16orf89Q6UX73 402 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 RNF44Q7L0R7 432 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 DDIASQ8IXT1 998 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 DNAJC22Q8N4W6 341 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 RP9Q8TA86 221 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 TWIST2Q8WVJ9 160 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 USP7Q93009 1102 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 NEIL2Q969S2 332 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 THAP11Q96EK4 314 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 OR4K3Q96R72 315 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 AIF1LQ9BQI0 150 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 CUEDC1Q9NWM3 386 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 ARMCX1Q9P291 453 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 KLHL20Q9Y2M5 609 aa12.88□□□□□ -0.35
CSNK1D-220ENST00000581737 MDC1Q14676 2089 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 IGKV1-8A0A0C4DH67 115 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 B2RBV5 119 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 TMEM150CB9EJG8 249 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms