RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 MSL3P1P0C860 447 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TROVE2P10155 538 aaKnown RBP eCLIP7.67□□□□□ -1.18
COPS3-215ENST00000578317 CDK4P11802 303 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CDH1P12830 882 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 MYF5P13349 255 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 HSD3B1P14060 373 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 EZRP15311 586 aaKnown RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 PSMB5P28074 263 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 GRK3P35626 688 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 AHRP35869 848 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 ZRSR2Q15696 482 aaKnown RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 CPSF6Q16630 551 aaKnown RBP eCLIP7.67□□□□□ -1.18
COPS3-215ENST00000578317 AASDHQ4L235 1098 aaPredicted RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 MANEAQ5SRI9 462 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 STPG1Q5TH74 334 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 FRG2Q64ET8 278 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CGB2Q6NT52 195 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 FBXO42Q6P3S6 717 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 FIGLAQ6QHK4 219 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 EPGNQ6UW88 154 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 PAQR7Q86WK9 346 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 KMT5CQ86Y97 462 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 NAXDQ8IW45 347 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TBC1D19Q8N5T2 526 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CDYL2Q8N8U2 506 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 GBP7Q8N8V2 638 aaPredicted RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 GALNT11Q8NCW6 608 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 IFI44Q8TCB0 444 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 NCSTNQ92542 709 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 TCTN2Q96GX1 697 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 MAELQ96JY0 434 aaKnown RBP7.67□□□□□ -1.18
COPS3-215ENST00000578317 TRAPPC9Q96Q05 1148 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 FRG2BQ96QU4 278 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CCDC3Q9BQI4 270 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 SHCBP1LQ9BZQ2 653 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 WNT10AQ9GZT5 417 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 LRRN3Q9H3W5 708 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 MEAF6Q9HAF1 191 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 BRF2Q9HAW0 419 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 KCNK13Q9HB14 408 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 SLC6A20Q9NP91 592 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 KLHL14Q9P2G3 628 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 PILRAQ9UKJ1 303 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 CCL27Q9Y4X3 112 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 PCDHGA1Q9Y5H4 931 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 USH1CQ9Y6N9 552 aa7.67□□□□□ -1.18
COPS3-215ENST00000578317 MN1Q10571 1320 aaPredicted RBP7.66□□□□□ -1.18
COPS3-215ENST00000578317 ARHGEF17Q96PE2 2063 aaPredicted RBP7.66□□□□□ -1.18
COPS3-215ENST00000578317 A0A1W2PQM1 296 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 SLC28A1O00337 649 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 MANBAO00462 879 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 NTN3O00634 580 aaPredicted RBP7.66□□□□□ -1.18
COPS3-215ENST00000578317 LCMT2O60294 686 aaKnown RBP7.66□□□□□ -1.18
COPS3-215ENST00000578317 SRPX2O60687 465 aaPredicted RBP7.66□□□□□ -1.18
COPS3-215ENST00000578317 VPS4BO75351 444 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 ZBTB11O95625 1053 aaPredicted RBP7.66□□□□□ -1.18
COPS3-215ENST00000578317 ANKRD34CP0C6C1 535 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 SERPINB3P29508 390 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 HMOX2P30519 316 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 LSSP48449 732 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 RPS15AP62244 130 aaKnown RBP7.66□□□□□ -1.18
COPS3-215ENST00000578317 CCL7P80098 99 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 REEP5Q00765 189 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 E2F1Q01094 437 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 IFT88Q13099 833 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 SLBPQ14493 270 aaKnown RBP eCLIP7.66□□□□□ -1.18
COPS3-215ENST00000578317 NKAIN2Q5VXU1 208 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 METTL21CQ5VZV1 264 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 FCRL6Q6DN72 434 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 CLEC6AQ6EIG7 209 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 Q6ZSR9 355 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 USP53Q70EK8 1073 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 ASCL5Q7RTU5 278 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 PRSS42Q7Z5A4 293 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 DCBLD1Q8N8Z6 715 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 Q8N9G6 341 aaPredicted RBP7.66□□□□□ -1.18
COPS3-215ENST00000578317 OR4D9Q8NGE8 314 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 TWIST2Q8WVJ9 160 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 KLHL6Q8WZ60 621 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 OR2A5Q96R48 311 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 KCNA7Q96RP8 456 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 TUBB1Q9H4B7 451 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 ELOVL6Q9H5J4 265 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 ABCF3Q9NUQ8 709 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 FTSJ1Q9UET6 329 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 ZFP69BQ9UJL9 534 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 APOBEC2Q9Y235 224 aaKnown RBP7.66□□□□□ -1.18
COPS3-215ENST00000578317 TIMM22Q9Y584 194 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 AP1M2Q9Y6Q5 423 aa7.66□□□□□ -1.18
COPS3-215ENST00000578317 TMEM233B4DJY2 109 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 CLEC3AO75596 197 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 KITP10721 976 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 MAGP20916 626 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 CDH3P22223 829 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 PRPH2P23942 346 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 PTX3P26022 381 aaPredicted RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 ARL1P40616 181 aaPredicted RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 ACADVLP49748 655 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ARFIP1P53367 373 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 AQP5P55064 265 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms