RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ZNF225Q9UK10 706 aa7.52□□□□□ -1.21
CCDC40-215ENST00000576033 PRDM4Q9UKN5 801 aa7.52□□□□□ -1.21
CCDC40-215ENST00000576033 ZNF490Q9ULM2 529 aaPredicted RBP7.52□□□□□ -1.21
CCDC40-215ENST00000576033 RNF11Q9Y3C5 154 aa7.52□□□□□ -1.21
CCDC40-215ENST00000576033 PCDHB3Q9Y5E6 796 aa7.52□□□□□ -1.21
CCDC40-215ENST00000576033 CACNA1BQ00975 2339 aa7.52□□□□□ -1.21
CCDC40-215ENST00000576033 TNRC6AQ8NDV7 1962 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 KCNE1BA0A087WTH5 132 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 A0A1B0GX78 115 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TRBC2A0A5B9 178 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ARHGAP10A1A4S6 786 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 WDR91A4D1P6 747 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 SYCE1LA8MT33 242 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 RTCAO00442 366 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 UBFD1O14562 309 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 DSCR3O14972 297 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 RDH16O75452 317 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ZNF888P0CJ79 500 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 C1GALT1C1LP0DN25 315 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 PCNAP12004 261 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ALOX15P16050 662 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 GRK2P25098 689 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ARRB2P32121 409 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 HTR6P50406 440 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 NEK2P51955 445 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 PRKAA2P54646 552 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ALDH18A1P54886 795 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 FOXA1P55317 472 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 CORO7P57737 925 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 RAB8AP61006 207 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 RPS15AP62244 130 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 IFT88Q13099 833 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 CHAF1BQ13112 559 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TRAF3Q13114 568 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 DDX39BQ13838 428 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 GTF2H2Q13888 395 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ERV3-1Q14264 604 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 CHI3L2Q15782 390 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 RBBP7Q16576 425 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ZC3H12BQ5HYM0 836 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TOR1AIP1Q5JTV8 583 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 MLIPQ5VWP3 458 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 FAM91A1Q658Y4 838 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 CPZQ66K79 652 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ATG9BQ674R7 924 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ATG16L1Q676U5 607 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 RHBDD2Q6NTF9 364 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TMEM214Q6NUQ4 689 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 GTF2H2CQ6P1K8 395 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 LETMD1Q6P1Q0 360 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ZNF517Q6ZMY9 492 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 RIPOR1Q6ZS17 1223 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ZCCHC23Q6ZST2 131 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TRPM8Q7Z2W7 1104 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ASPGQ86U10 573 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TCAIMQ8N3R3 496 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ESX1Q8N693 406 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 CCDC63Q8NA47 563 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TTC29Q8NA56 475 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TRPC4APQ8TEL6 797 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 CREB3L4Q8TEY5 395 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ZNF483Q8TF39 744 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 STON2Q8WXE9 905 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 STARD8Q92502 1023 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 RERGQ96A58 199 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 MTFMTQ96DP5 389 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TM4SF19Q96DZ7 209 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 CCNL2Q96S94 520 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 SORT1Q99523 831 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 MRPL57Q9BQC6 102 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 SIKE1Q9BRV8 207 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 ZPBPQ9BS86 351 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 NDC1Q9BTX1 674 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 C20orf27Q9GZN8 174 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 PCBD2Q9H0N5 130 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 GSTO2Q9H4Y5 243 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 SOX17Q9H6I2 414 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 NOL11Q9H8H0 719 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 GPN2Q9H9Y4 310 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 PELI2Q9HAT8 420 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 FARSBQ9NSD9 589 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 TXLNGQ9NUQ3 528 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 THAP1Q9NVV9 213 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 HAO1Q9UJM8 370 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 SERTAD3Q9UJW9 196 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 SNX7Q9UNH6 387 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 SLC12A4Q9UP95 1085 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 SSUH2Q9Y2M2 353 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 RRP15Q9Y3B9 282 aaKnown RBP7.51□□□□□ -1.21
CCDC40-215ENST00000576033 PTGDR2Q9Y5Y4 395 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 KCNE2Q9Y6J6 123 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 USH1CQ9Y6N9 552 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 CFAP46Q8IYW2 2715 aa7.51□□□□□ -1.21
CCDC40-215ENST00000576033 CCDC189A1A4V9 331 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 TMEM114B3SHH9 223 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 RRP8O43159 456 aaKnown RBP7.5□□□□□ -1.21
CCDC40-215ENST00000576033 SMIM24O75264 130 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 H2AFYO75367 372 aaKnown RBP7.5□□□□□ -1.21
CCDC40-215ENST00000576033 DNAJB5O75953 348 aa7.5□□□□□ -1.21
CCDC40-215ENST00000576033 IPO13O94829 963 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms