RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 KRT6BP04259 564 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 MSL3P1P0C860 447 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 EZRP15311 586 aaKnown RBP11.3□□□□□ -0.6
NDE1-206ENST00000572967 MAGP20916 626 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 GDF5P43026 501 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 SLC1A6P48664 564 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 KRT6CP48668 564 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 ZNF33BQ06732 778 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 BST1Q10588 318 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 KLRB1Q12918 225 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 ATP1A4Q13733 1029 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 FASTKQ14296 549 aaKnown RBP11.3□□□□□ -0.6
NDE1-206ENST00000572967 NCF4Q15080 339 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 IGFBP7Q16270 282 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 GGTA1PQ4G0N0 100 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 ATG9BQ674R7 924 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 TCTN3Q6NUS6 607 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 NXPE4Q6UWF7 544 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 MILR1Q7Z6M3 343 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 ABHD11Q8NFV4 315 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 OR2A1Q8NGT9 310 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 ADAMTS17Q8TE56 1095 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 TRPC4APQ8TEL6 797 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 THAP4Q8WY91 577 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 CCT6BQ92526 530 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 ZNF75CPQ92670 426 aaPredicted RBP11.3□□□□□ -0.6
NDE1-206ENST00000572967 ZUFSPQ96AP4 578 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 THAP11Q96EK4 314 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 WDR34Q96EX3 536 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 C7orf26Q96N11 449 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 CCT7Q99832 543 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 ACAT2Q9BWD1 397 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 GSTO2Q9H4Y5 243 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 NOL11Q9H8H0 719 aaKnown RBP11.3□□□□□ -0.6
NDE1-206ENST00000572967 MID1IP1Q9NPA3 183 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 TMEM184CQ9NVA4 438 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 DHCR7Q9UBM7 475 aaKnown RBP11.3□□□□□ -0.6
NDE1-206ENST00000572967 ADGRE2Q9UHX3 823 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 SERTAD3Q9UJW9 196 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 TCFL5Q9UL49 500 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 SNX6Q9UNH7 406 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 RAP2CQ9Y3L5 183 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 KLK4Q9Y5K2 254 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 HELZ2Q9BYK8 2649 aaKnown RBP11.3□□□□□ -0.6
NDE1-206ENST00000572967 MED13Q9UHV7 2174 aa11.3□□□□□ -0.6
NDE1-206ENST00000572967 BOD1L1Q8NFC6 3051 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 A0A1W2PPV9 198 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 POLR3GO15318 223 aaPredicted RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 ZSCAN9O15535 394 aaPredicted RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 CAPN1P07384 714 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 RAB40ALP0C0E4 278 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 C1GALT1C1LP0DN25 315 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 CDH1P12830 882 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 NPPBP16860 134 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 PSMB5P28074 263 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 HMOX2P30519 316 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 OTX2P32243 289 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 CASP2P42575 452 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 GABRA4P48169 554 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 FOXL2P58012 376 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 RELAQ04206 551 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 IFT88Q13099 833 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 CHIT1Q13231 466 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 C18orf21Q32NC0 220 aaPredicted RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 ARL13AQ5H913 290 aaPredicted RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 ZC3H12BQ5HYM0 836 aaKnown RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 ZNF385CQ66K41 422 aaPredicted RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 TTC19Q6DKK2 380 aaPredicted RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 GRHL2Q6ISB3 625 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 ZCCHC23Q6ZST2 131 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 CUZD1Q86UP6 607 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 APLFQ8IW19 511 aaPredicted RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 WDR75Q8IWA0 830 aaKnown RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 ZNF655Q8N720 491 aaPredicted RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 L3MBTL4Q8NA19 623 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 OR6Y1Q8NGX8 325 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 NEIL2Q969S2 332 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 ESAMQ96AP7 390 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 TCTN2Q96GX1 697 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 SIKE1Q9BRV8 207 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 SLC25A23Q9BV35 468 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 NLNQ9BYT8 704 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 CHRNA10Q9GZZ6 450 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 SPRTNQ9H040 489 aaPredicted RBP11.29□□□□□ -0.6
NDE1-206ENST00000572967 ING2Q9H160 280 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 ELOVL6Q9H5J4 265 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 PCDHGA11Q9Y5H2 935 aa11.29□□□□□ -0.6
NDE1-206ENST00000572967 H3BMH7 237 aa11.28□□□□□ -0.6
NDE1-206ENST00000572967 TXNDC9O14530 226 aa11.28□□□□□ -0.6
NDE1-206ENST00000572967 AZIN1O14977 448 aa11.28□□□□□ -0.6
NDE1-206ENST00000572967 PRICKLE3O43900 615 aaPredicted RBP11.28□□□□□ -0.6
NDE1-206ENST00000572967 SNNO75324 88 aaPredicted RBP11.28□□□□□ -0.6
NDE1-206ENST00000572967 RECKO95980 971 aa11.28□□□□□ -0.6
NDE1-206ENST00000572967 VIMP08670 466 aaKnown RBP11.28□□□□□ -0.6
NDE1-206ENST00000572967 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
NDE1-206ENST00000572967 UROSP10746 265 aa11.28□□□□□ -0.6
NDE1-206ENST00000572967 AGXTP21549 392 aa11.28□□□□□ -0.6
NDE1-206ENST00000572967 CCL11P51671 97 aa11.28□□□□□ -0.6
NDE1-206ENST00000572967 PGDP52209 483 aa11.28□□□□□ -0.6
NDE1-206ENST00000572967 MLLT10P55197 1068 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms