RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 DOHHQ9BU89 302 aa14.75□□□□□ -0.05
USP43-202ENST00000570475 YIPF2Q9BWQ6 316 aa14.75□□□□□ -0.05
USP43-202ENST00000570475 SPG21Q9NZD8 308 aa14.75□□□□□ -0.05
USP43-202ENST00000570475 SLC6A14Q9UN76 642 aa14.75□□□□□ -0.05
USP43-202ENST00000570475 ITM2BQ9Y287 266 aa14.75□□□□□ -0.05
USP43-202ENST00000570475 MKI67P46013 3256 aaKnown RBP14.75□□□□□ -0.05
USP43-202ENST00000570475 TRBC2A0A5B9 178 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 WWP2O00308 870 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 PRAMEF4O60810 478 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 RFPL2O75678 378 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 AP2A2O94973 939 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 ZDHHC11BP0C7U3 371 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 ALPPL2P10696 532 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 SPNP16150 400 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 PTSQ03393 145 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 RGNQ15493 299 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 C10orf62Q5T681 223 aaPredicted RBP14.74□□□□□ -0.05
USP43-202ENST00000570475 ZNF697Q5TEC3 545 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 UBE2UQ5VVX9 321 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 PRAMEF9Q5VWM5 478 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 CD99L2Q8TCZ2 262 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 XAGE5Q8WWM1 108 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 IPCEF1Q8WWN9 437 aaPredicted RBP14.74□□□□□ -0.05
USP43-202ENST00000570475 TVP23BQ9NYZ1 205 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 PCDHGA4Q9Y5G9 962 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 TMEM189-UBE2V1I3L0A0 370 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 CCL16O15467 120 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 HLA-EP13747 358 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 JUPP14923 745 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 CDK6Q00534 326 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 OLIG3Q7RTU3 272 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 LSRQ86X29 649 aaPredicted RBP14.74□□□□□ -0.05
USP43-202ENST00000570475 EXOSC8Q96B26 276 aaKnown RBP14.74□□□□□ -0.05
USP43-202ENST00000570475 MGLLQ99685 303 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 SLC12A9Q9BXP2 914 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 RMI1Q9H9A7 625 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 KLHL20Q9Y2M5 609 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 KIAA0100Q14667 2235 aaKnown RBP14.74□□□□□ -0.05
USP43-202ENST00000570475 SDK1Q7Z5N4 2213 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 GREB1Q4ZG55 1949 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 ARHGEF33A8MVX0 844 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 TTC34A8MYJ7 566 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 WBP4O75554 376 aaKnown RBP14.74□□□□□ -0.05
USP43-202ENST00000570475 ALDH1A1P00352 501 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 ITGAMP11215 1152 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 HOXA9P31269 272 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 TGM4P49221 684 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 CTSCP53634 463 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 HBA1P69905 142 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 B4GALNT1Q00973 533 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 MRPL58Q14197 206 aaKnown RBP14.74□□□□□ -0.05
USP43-202ENST00000570475 FAM214AQ32MH5 1076 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 TRAF7Q6Q0C0 670 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 PTOV1Q86YD1 416 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 CCDC71Q8IV32 467 aaPredicted RBP14.74□□□□□ -0.05
USP43-202ENST00000570475 TRIM48Q8IWZ4 208 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 CHPFQ8IZ52 775 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 AP2M1Q96CW1 435 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 ZNF300Q96RE9 604 aaPredicted RBP14.74□□□□□ -0.05
USP43-202ENST00000570475 B3GNT3Q9Y2A9 372 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 PCDHGA6Q9Y5G7 932 aa14.74□□□□□ -0.05
USP43-202ENST00000570475 TMEM221A6NGB7 291 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 UPK1BO75841 260 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 IGFBP1P08833 259 aaPredicted RBP14.73□□□□□ -0.05
USP43-202ENST00000570475 SRCP12931 536 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 SYT6Q5T7P8 510 aaPredicted RBP14.73□□□□□ -0.05
USP43-202ENST00000570475 C22orf39Q6P5X5 142 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 CBLL1Q75N03 491 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 MMP21Q8N119 569 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 DEPDC4Q8N2C3 294 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 PARP16Q8N5Y8 322 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 SCAIQ8N9R8 606 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 B3GNT7Q8NFL0 401 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 ASB11Q8WXH4 323 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 NEUROG3Q9Y4Z2 214 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 TET1Q8NFU7 2136 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 SSX4O60224 188 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 LZTS3O60299 673 aaPredicted RBP14.73□□□□□ -0.05
USP43-202ENST00000570475 TMCC2O75069 709 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 BCHEP06276 602 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 FHP07954 510 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 RPS3P23396 243 aaKnown RBP eCLIP14.73□□□□□ -0.05
USP43-202ENST00000570475 CD6P30203 668 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 CNR2P34972 360 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 MAPK8P45983 427 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 MANFP55145 182 aaKnown RBP14.73□□□□□ -0.05
USP43-202ENST00000570475 OR2B6P58173 313 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 SP3Q02447 781 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 TMEM25Q86YD3 366 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 ZNF740Q8NDX6 193 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 OR7G3Q8NG95 312 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 SCRN2Q96FV2 425 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 EMILIN2Q9BXX0 1053 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 FAM120CQ9NX05 1096 aaKnown RBP14.73□□□□□ -0.05
USP43-202ENST00000570475 KLHL3Q9UH77 587 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 ZNF232Q9UNY5 417 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 WBP11Q9Y2W2 641 aaKnown RBP14.73□□□□□ -0.05
USP43-202ENST00000570475 RALGAPA2Q2PPJ7 1873 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 MYO16Q9Y6X6 1858 aa14.73□□□□□ -0.05
USP43-202ENST00000570475 CLCA1A8K7I4 914 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms