RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SLAMF7Q9NQ25 335 aa6.9□□□□□ -1.31
CNOT1-216ENST00000569240 KPTNQ9Y664 436 aa6.9□□□□□ -1.31
CNOT1-216ENST00000569240 CLCA3PQ9Y6N3 262 aa6.9□□□□□ -1.31
CNOT1-216ENST00000569240 SLC22A31A6NKX4 558 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ERCC1P07992 297 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CXCL8P10145 99 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 MTPNP58546 118 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 GBE1Q04446 702 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 MLLT11Q13015 90 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 TAF1AQ15573 450 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 GHDCQ8N2G8 530 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 YIPF7Q8N8F6 280 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 PROKR2Q8NFJ6 384 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 OR10H4Q8NGA5 316 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ERCC6L2Q5T890 1561 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 EIF3FO00303 357 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CYB5AP00167 134 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 INHAP05111 366 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 PIM1P11309 404 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ELK4P28324 431 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 EVI2BP34910 448 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SERPINF1P36955 418 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CEBPAP49715 358 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CRYZQ08257 329 aaKnown RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 GNMTQ14749 295 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 TRAM2Q15035 370 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 PGM5Q15124 567 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 NLRP8Q86W28 1048 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 LNX2Q8N448 690 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 PARP16Q8N5Y8 322 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 BBS10Q8TAM1 723 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 MARVELD3Q96A59 401 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 RAB39BQ96DA2 213 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SAMD11Q96NU1 681 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 PIP5K1AQ99755 562 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SEMA3CQ99985 751 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 TSSK6Q9BXA6 273 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ULBP1Q9BZM6 244 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ERVMER34-1Q9H9K5 563 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ZDHHC2Q9UIJ5 367 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ACSL6Q9UKU0 697 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 COL1A2P08123 1366 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 MAFO75444 373 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 GRM5P41594 1212 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 IL10RBQ08334 325 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 TATDN3Q17R31 274 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 USP41Q3LFD5 358 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 C14orf28Q4W4Y0 310 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CD163Q86VB7 1156 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 COMMD2Q86X83 199 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 TM9SF4Q92544 642 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 TRIM43Q96BQ3 446 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 FBXL18Q96ME1 805 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 TAAR1Q96RJ0 339 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 KATNBL1Q9H079 304 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 PLIN4Q96Q06 1357 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 UBE2Q2LH0YL09 131 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 FFAR3O14843 346 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 GPR42O15529 346 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 RGS11O94810 467 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ERVK-25P63136 954 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CRADDP78560 199 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 HTRA4P83105 476 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ELP2Q6IA86 826 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SLC27A4Q6P1M0 643 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF783Q6ZMS7 281 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 RAVER1Q8IY67 606 aaKnown RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.89□□□□□ -1.316e-7■■■■■ 39.7
CNOT1-216ENST00000569240 GTPBP3Q969Y2 492 aaKnown RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 OR14A2Q96R54 314 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 KXD1Q9BQD3 176 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 MRPL45Q9BRJ2 306 aaKnown RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 MED18Q9BUE0 208 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ITM2CQ9NQX7 267 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 IKZF2Q9UKS7 526 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ATG4BQ9Y4P1 393 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SOCS2O14508 198 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 RAD1O60671 282 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 HLA-DQA2P01906 255 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SNHG28P0DPA3 235 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 RPS12P25398 132 aaKnown RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CDK6Q00534 326 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CLEC6AQ6EIG7 209 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 UBE2R2Q712K3 238 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-216ENST00000569240 PLPPR4Q7Z2D5 763 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 SLC35G5Q96KT7 338 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 NELL2Q99435 816 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 MS4A12Q9NXJ0 267 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 HRH3Q9Y5N1 445 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 UNC13AQ9UPW8 1703 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CLDN11O75508 207 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 OR4F21O95013 312 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 RENP00797 406 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ADRB1P08588 477 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 RAB40ALP0C0E4 278 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 ARL4DP49703 201 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 CPT1AP50416 773 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 BTN1A1Q13410 526 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 PLAG1Q6DJT9 500 aa6.89□□□□□ -1.31
CNOT1-216ENST00000569240 OR6J1Q8NGC5 347 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms