RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 BMP8BP34820 402 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 REEP5Q00765 189 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 MYBPC3Q14896 1274 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 C16orf72Q14CZ0 275 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 RGNQ15493 299 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 CNPY1Q3B7I2 92 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMPD3-211ENST00000568373 KCTD21Q4G0X4 260 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3GQ6DHY5 549 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3CQ6IPX1 549 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TTC33Q6PID6 262 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-211ENST00000568373 IKBIPQ70UQ0 350 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D3Q8IZP1 549 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-211ENST00000568373 ANKRD53Q8N9V6 530 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 MTERF3Q96E29 417 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 APOOQ9BUR5 198 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 SOX17Q9H6I2 414 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-211ENST00000568373 PREBQ9HCU5 417 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 FZD3Q9NPG1 666 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 AHSPQ9NZD4 102 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 RPS6KA6Q9UK32 745 aa17.37■□□□□ 0.37
SMPD3-211ENST00000568373 PRR19A6NJB7 356 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 SEMA3DO95025 777 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 THRBP10828 461 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 HBA1P69905 142 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 CTBSQ01459 385 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 KHDRBS2Q5VWX1 349 aaKnown RBP17.36■□□□□ 0.37
SMPD3-211ENST00000568373 OFCC1Q8IZS5 231 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 ZNF786Q8N393 782 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 RDH12Q96NR8 316 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 MS4A8Q9BY19 250 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 PITHD1Q9GZP4 211 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-211ENST00000568373 PRO3102Q9H379 93 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 IMP3Q9NV31 184 aaKnown RBP17.36■□□□□ 0.37
SMPD3-211ENST00000568373 SPASTQ9UBP0 616 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 SUFUQ9UMX1 484 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 SCML1Q9UN30 329 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 BRWD1Q9NSI6 2320 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 HEATR5BQ9P2D3 2071 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 H7BY64 318 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 PLPP1O14494 284 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 KCNJ13O60928 360 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 OR6B1O95007 311 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 TPP2P29144 1249 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-211ENST00000568373 SERPINB1P30740 379 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 CYP4F2P78329 520 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 PPP2R2BQ00005 443 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 SPIDRQ14159 915 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 MPEG1Q2M385 716 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 DEPDC1Q5TB30 811 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 ABRAXAS1Q6UWZ7 409 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 ZDHHC21Q8IVQ6 265 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 OR5K1Q8NHB7 308 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 CIDECQ96AQ7 238 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-211ENST00000568373 CAMK1GQ96NX5 476 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 PRAP1Q96NZ9 151 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 SORBS1Q9BX66 1292 aaKnown RBP17.36■□□□□ 0.37
SMPD3-211ENST00000568373 OSBPL10Q9BXB5 764 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 USE1Q9NZ43 259 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 MOSPD1Q9UJG1 213 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 PLEKHM1Q9Y4G2 1056 aa17.36■□□□□ 0.37
SMPD3-211ENST00000568373 CACNB4O00305 520 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-211ENST00000568373 GPR37L1O60883 481 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 C6orf47O95873 294 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 NTRK1P04629 796 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 IL3P08700 152 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 NUDT7P0C024 238 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 LTBRP36941 435 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 DCTP40126 519 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 RAB28P51157 221 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 TUBA4AP68366 448 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 CLCA4Q14CN2 919 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 SPESP1Q6UW49 350 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 HS3ST5Q8IZT8 346 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 RBM4BQ9BQ04 359 aaKnown RBP17.35■□□□□ 0.37
SMPD3-211ENST00000568373 RBM4Q9BWF3 364 aaKnown RBP17.35■□□□□ 0.37
SMPD3-211ENST00000568373 ZNF717Q9BY31 904 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-211ENST00000568373 NT5DC2Q9H857 520 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 IL1RAPQ9NPH3 570 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 GPSM3Q9Y4H4 160 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 FEZF1A0PJY2 475 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 SLC31A1O15431 190 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 E2F6O75461 281 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 SEC24DO94855 1032 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-211ENST00000568373 PPP2CBP62714 309 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 PPP2CAP67775 309 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 ZIK1Q3SY52 487 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-211ENST00000568373 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMPD3-211ENST00000568373 CCNYL2Q5T2Q4 361 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 CBLL1Q75N03 491 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 EIF3MQ7L2H7 374 aaKnown RBP17.35■□□□□ 0.37
SMPD3-211ENST00000568373 GALNT10Q86SR1 603 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 TRIML2Q8N7C3 387 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 SIPA1Q96FS4 1042 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 MSLNLQ96KJ4 702 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 MYOCQ99972 504 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 SMURF2Q9HAU4 748 aa17.35■□□□□ 0.37
SMPD3-211ENST00000568373 TRIM64A6NGJ6 449 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 SEMG1P04279 462 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 MVDP53602 400 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms