RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SPANXN2Q5MJ10 180 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 PAQR6Q6TCH4 344 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 NPAS3Q8IXF0 933 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 PARP16Q8N5Y8 322 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 MRPS31Q92665 395 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 FATE1Q969F0 183 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 PPP1R14BQ96C90 147 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 RDH12Q96NR8 316 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 MIEF1Q9NQG6 463 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SH2B3Q9UQQ2 575 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 TRBV5-3A0A0A0MS03 114 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 OR2A25A4D2G3 310 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SOBPA7XYQ1 873 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 OR10H3O60404 316 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 KCNK2O95069 426 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SNX4O95219 450 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 C1SP09871 688 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 TGM1P22735 817 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 PTPN6P29350 595 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 TAS2R50P59544 299 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 PFN3P60673 137 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 CSTF3Q12996 717 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SCARB2Q14108 478 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 SLBPQ14493 270 aaKnown RBP eCLIP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 ARSIQ5FYB1 569 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 CHST9Q7L1S5 443 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 CALHM3Q86XJ0 350 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 TMEM25Q86YD3 366 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 LYSMD2Q8IV50 215 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 AMER2Q8N7J2 671 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 C11orf65Q8NCR3 313 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 ZNF461Q8TAF7 563 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 CDK5RAP1Q96SZ6 601 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 MRPL17Q9NRX2 175 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 CLEC2DQ9UHP7 191 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 GON4LQ3T8J9 2241 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 GLOD5A6NK44 160 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 WASHC1A8K0Z3 465 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 C5orf58C9J3I9 102 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 H7C0S8 307 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 ADORA3P0DMS8 318 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 GZMMP51124 257 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 METAP1P53582 386 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 CAV3P56539 151 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 WNT3P56703 355 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 RAB25P57735 213 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 ELP6Q0PNE2 266 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 TMEM220Q6QAJ8 160 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 WASH2PQ6VEQ5 465 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 MACC1Q6ZN28 852 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 EIF3MQ7L2H7 374 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 NANOGNBQ7Z5D8 188 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 FAM20CQ8IXL6 584 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 CYP4Z2PQ8N1L4 340 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 B3GNT7Q8NFL0 401 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 CSGALNACT1Q8TDX6 532 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 DOK4Q8TEW6 326 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 ING5Q8WYH8 240 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 NEIL2Q969S2 332 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 NEDD4LQ96PU5 975 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 MACROD1Q9BQ69 325 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 TTYH2Q9BSA4 534 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 FAM83DQ9H4H8 585 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 DUSP21Q9H596 190 aa8.62□□□□□ -1.03
HDGFL3-206ENST00000568294 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 PDZK1P1A8MUH7 402 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 MED26O95402 600 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 RPLP0P05388 317 aaKnown RBP8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 BCHEP06276 602 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 ITGAMP11215 1152 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 TGFBR2P37173 567 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 EIF2DP41214 584 aaKnown RBP8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 TLE2Q04725 743 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 ELAVL2Q12926 359 aaKnown RBP8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 RGNQ15493 299 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 FXNQ16595 210 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 C22orf39Q6P5X5 142 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 TPRG1Q6ZUI0 275 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 PRSS48Q7RTY5 328 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 RBM45Q8IUH3 476 aaKnown RBP8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 METTL4Q8N3J2 472 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 PDLIM5Q96HC4 596 aaKnown RBP8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 SLC29A3Q9BZD2 475 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 ABCG4Q9H172 646 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 MMP28Q9H239 520 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 TRPC4Q9UBN4 977 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 TMPRSS11EQ9UL52 423 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 NDRG4Q9ULP0 352 aaKnown RBP8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 PCDHB11Q9Y5F2 797 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 RANBP2P49792 3224 aaKnown RBP8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 PRAMEF33A0A0G2JMD5 474 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 TMEM189-UBE2V1I3L0A0 370 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 PRAMEF10O60809 474 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 RFPL2O75678 378 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 UPK1BO75841 260 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 APOA1P02647 267 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 CNR2P34972 360 aa8.61□□□□□ -1.03
HDGFL3-206ENST00000568294 PIK3CBP42338 1070 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms