RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 PDZD3Q86UT5 571 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 ZBTB46Q86UZ6 589 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 SPARTQ8N0X7 666 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.94■□□□□ 0.46
MSLN-207ENST00000566549 DGCR6LQ9BY27 220 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 ZNF282Q9UDV7 671 aaPredicted RBP17.94■□□□□ 0.46
MSLN-207ENST00000566549 SUV39H1O43463 412 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 LATO43561 262 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 PI15O43692 258 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 CPNE6O95741 557 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 FCARP24071 287 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 EPHA2P29317 976 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 DNAJA1P31689 397 aaKnown RBP17.94■□□□□ 0.46
MSLN-207ENST00000566549 SOAT1P35610 550 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 FOXD4Q12950 439 aaPredicted RBP17.94■□□□□ 0.46
MSLN-207ENST00000566549 VEZF1Q14119 521 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 FGD3Q5JSP0 725 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 PGBD3Q8N328 593 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 ATG16L2Q8NAA4 619 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 SPPL2AQ8TCT8 520 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 RAD51AP1Q96B01 352 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 BHLHE41Q9C0J9 482 aaPredicted RBP17.94■□□□□ 0.46
MSLN-207ENST00000566549 LHPPQ9H008 270 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 RUBCNLQ9H714 662 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 TIMMDC1Q9NPL8 285 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 CUEDC1Q9NWM3 386 aaPredicted RBP17.94■□□□□ 0.46
MSLN-207ENST00000566549 PAK1IP1Q9NWT1 392 aaPredicted RBP17.94■□□□□ 0.46
MSLN-207ENST00000566549 THUMPD1Q9NXG2 353 aaKnown RBP17.94■□□□□ 0.46
MSLN-207ENST00000566549 SERGEFQ9UGK8 458 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 ATP6V1HQ9UI12 483 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 ZNF451Q9Y4E5 1061 aa17.94■□□□□ 0.46
MSLN-207ENST00000566549 FEZF1A0PJY2 475 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 SLC1A7O00341 560 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 GCM2O75603 506 aaPredicted RBP17.93■□□□□ 0.46
MSLN-207ENST00000566549 KAT7O95251 611 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 DRD3P35462 400 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 LBX1P52954 281 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 CDK3Q00526 305 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 WSCD2Q2TBF2 565 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 C11orf65Q8NCR3 313 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 OR13F1Q8NGS4 319 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 POP5Q969H6 163 aaKnown RBP17.93■□□□□ 0.46
MSLN-207ENST00000566549 REEP1Q9H902 201 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 MBNL1Q9NR56 388 aaKnown RBP17.93■□□□□ 0.46
MSLN-207ENST00000566549 MAN1A2O60476 641 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 POU2F2P09086 479 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 FPR1P21462 350 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 FMO3P31513 532 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 CLK3P49761 638 aaKnown RBP17.93■□□□□ 0.46
MSLN-207ENST00000566549 MVDP53602 400 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 SKIV2LQ15477 1246 aaKnown RBP17.93■□□□□ 0.46
MSLN-207ENST00000566549 RFX4Q33E94 735 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 LRRTM4Q86VH4 590 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 COX14Q96I36 57 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 PLA2G2FQ9BZM2 168 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 MTIF3Q9H2K0 278 aaKnown RBP17.93■□□□□ 0.46
MSLN-207ENST00000566549 EHD1Q9H4M9 534 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 SFXN1Q9H9B4 322 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 ATAD3AQ9NVI7 634 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 ADPRHL2Q9NX46 363 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 SIRT5Q9NXA8 310 aa17.93■□□□□ 0.46
MSLN-207ENST00000566549 SLC16A6O15403 523 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 KELP23276 732 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 TTKP33981 857 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 CHI3L1P36222 383 aaPredicted RBP17.92■□□□□ 0.46
MSLN-207ENST00000566549 OR1E2P47887 323 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 GSSP48637 474 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 KCNJ10P78508 379 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 BIRC2Q13490 618 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 RUNX3Q13761 415 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 KDM4DQ6B0I6 523 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 FAM71E1Q6IPT2 247 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 UNC5DQ6UXZ4 953 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 RNF130Q86XS8 419 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 DCUN1D3Q8IWE4 304 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 METTL4Q8N3J2 472 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 NFKBIDQ8NI38 313 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 GAB3Q8WWW8 586 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 HDAC8Q9BY41 377 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 THAP10Q9P2Z0 257 aaPredicted RBP17.92■□□□□ 0.46
MSLN-207ENST00000566549 CORO2BQ9UQ03 480 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 PCM1Q15154 2024 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 HOXB6P17509 224 aaKnown RBP17.92■□□□□ 0.46
MSLN-207ENST00000566549 CD247P20963 164 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 NR4A1P22736 598 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 PPIBP23284 216 aaKnown RBP17.92■□□□□ 0.46
MSLN-207ENST00000566549 ITGA1P56199 1179 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 TAS2R38P59533 333 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 CDK5R2Q13319 367 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 SLC5A12Q1EHB4 618 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 C7orf34Q96L11 122 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 KXD1Q9BQD3 176 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 GABARAPL1Q9H0R8 117 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 OSGEPL1Q9H4B0 414 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 MIEF1Q9NQG6 463 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 KRT84Q9NSB2 600 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 BLOC1S6Q9UL45 172 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 MAPRE3Q9UPY8 281 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 TESMINQ9Y4I5 508 aa17.92■□□□□ 0.46
MSLN-207ENST00000566549 TMEM229AB2RXF0 380 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms