RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 NDUFS4O43181 175 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 LRRTM2O43300 516 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 CHST10O43529 356 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 CELA2AP08217 269 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 GNAZP19086 355 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 HPDP32754 393 aaPredicted RBP14.27□□□□□ -0.13
CMTM3-212ENST00000566121 TAS2R39P59534 338 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 PCDH1Q08174 1060 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 PDIA2Q13087 525 aaKnown RBP14.27□□□□□ -0.13
CMTM3-212ENST00000566121 E2F2Q14209 437 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 USP10Q14694 798 aaKnown RBP14.27□□□□□ -0.13
CMTM3-212ENST00000566121 ABRAXAS2Q15018 415 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 ZRSR2Q15696 482 aaKnown RBP14.27□□□□□ -0.13
CMTM3-212ENST00000566121 BTBD16Q32M84 506 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 KRTCAP3Q53RY4 240 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 CATSPEREQ5SY80 951 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 MTFR2Q6P444 385 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 LANCL3Q6ZV70 420 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 KLHL7Q8IXQ5 586 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 SLC5A8Q8N695 610 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 HORMAD2Q8N7B1 307 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 ANKRD53Q8N9V6 530 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 MDS2Q8NDY4 140 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 FBXO36Q8NEA4 188 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 C7orf57Q8NEG2 295 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 CREB3L4Q8TEY5 395 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 THAP3Q8WTV1 239 aaPredicted RBP14.27□□□□□ -0.13
CMTM3-212ENST00000566121 RHBDF1Q96CC6 855 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 CFAP36Q96G28 342 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 SCMH1Q96GD3 660 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 MACROD1Q9BQ69 325 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 ERP44Q9BS26 406 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 HCN3Q9P1Z3 774 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 IKZF3Q9UKT9 509 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 OSGIN2Q9Y236 505 aa14.27□□□□□ -0.13
CMTM3-212ENST00000566121 MYO7BQ6PIF6 2116 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 SCN3AQ9NY46 2000 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 IGKV3D-11A0A0A0MRZ8 115 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 FAM95CA0A1B0GW59 222 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 TCRBV16S1A1N1A0A5B0 115 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 CCDC189A1A4V9 331 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 USP27XA6NNY8 438 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 SEC24DO94855 1032 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-212ENST00000566121 MLYCDO95822 493 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 C1GALT1C1LP0DN25 315 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 TRHRP34981 398 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-212ENST00000566121 RPL21P46778 160 aaKnown RBP14.26□□□□□ -0.13
CMTM3-212ENST00000566121 SLC26A5P58743 744 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 ATP6V0D1P61421 351 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 ZNF33BQ06732 778 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 TUBA3CQ13748 450 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 ADPRMQ3LIE5 342 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 SFT2D3Q587I9 215 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 TUBA3EQ6PEY2 450 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 PAPD4Q6PIY7 484 aaKnown RBP14.26□□□□□ -0.13
CMTM3-212ENST00000566121 TICAM1Q8IUC6 712 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 WDR34Q96EX3 536 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 TSPAN17Q96FV3 270 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 PWWP2AQ96N64 755 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 SLC17A6Q9P2U8 582 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 SLC22A14Q9Y267 594 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 MMACHCQ9Y4U1 282 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 KLF2Q9Y5W3 355 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-212ENST00000566121 CSMD1Q96PZ7 3565 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 TACC2O95359 2948 aa14.26□□□□□ -0.13
CMTM3-212ENST00000566121 CDC7O00311 574 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 PRMT3O60678 531 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 H2AFYO75367 372 aaKnown RBP14.25□□□□□ -0.13
CMTM3-212ENST00000566121 CLEC3AO75596 197 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 GUCA1CO95843 209 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 RNH1P13489 461 aaKnown RBP14.25□□□□□ -0.13
CMTM3-212ENST00000566121 CASP2P42575 452 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 TAS2R50P59544 299 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 STXBP1P61764 594 aaKnown RBP14.25□□□□□ -0.13
CMTM3-212ENST00000566121 CAV1Q03135 178 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 ACTN3Q08043 901 aaPredicted RBP14.25□□□□□ -0.13
CMTM3-212ENST00000566121 ART3Q13508 389 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 TGFBIQ15582 683 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 DEFB134Q4QY38 66 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 ZNF766Q5HY98 468 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 SLCO4C1Q6ZQN7 724 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 ZCCHC10Q8TBK6 192 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 ADAMTS18Q8TE60 1221 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 PYROXD1Q8WU10 500 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 ANKRD49Q8WVL7 239 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 CDKL2Q92772 493 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 MOCOSQ96EN8 888 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 PEX11GQ96HA9 241 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 CAPZA3Q96KX2 299 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 UBXN10Q96LJ8 280 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 NPAS2Q99743 824 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 CPNE1Q99829 537 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 UTP23Q9BRU9 249 aaKnown RBP14.25□□□□□ -0.13
CMTM3-212ENST00000566121 TRIM51Q9BSJ1 452 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 CNOT10Q9H9A5 744 aaKnown RBP14.25□□□□□ -0.13
CMTM3-212ENST00000566121 KCNK13Q9HB14 408 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 GPAMQ9HCL2 828 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 PRDM9Q9NQV7 894 aa14.25□□□□□ -0.13
CMTM3-212ENST00000566121 RYDENQ9NUL5 291 aaKnown RBP14.25□□□□□ -0.13
CMTM3-212ENST00000566121 CTNNAL1Q9UBT7 734 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms