RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FBXL8Q96CD0 374 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 SECISBP2Q96T21 854 aaKnown RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 CIB1Q99828 191 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 JAM3Q9BX67 310 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ELOVL6Q9H5J4 265 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 LDAHQ9H6V9 325 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 CWH43Q9H720 699 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 MRPL17Q9NRX2 175 aaKnown RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 MRPL39Q9NYK5 338 aaKnown RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 TMEM5Q9Y2B1 443 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 COMMD3-BMI1R4GMX3 469 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 hCG_1809904A0A1W2PP81 198 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 A0A1W2PPE2 198 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 A0A1W2PR64 198 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 A0A1W2PRV1 198 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 OR6C65A6NJZ3 312 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 GLOD5A6NK44 160 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 D6RAR5 112 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 APOL3O95236 402 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ANXA5P08758 320 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 FSHRP23945 695 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 HOXA9P31269 272 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 RHOAP61586 193 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 TIAL1Q01085 375 aaKnown RBP eCLIP3.24□□□□□ -1.893e-8■■■■■ 28.9
CHD9-213ENST00000564845 SMAGPQ0VAQ4 97 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 TRAF2Q12933 501 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 PDK4Q16654 411 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 CRTC3Q6UUV7 619 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ANGPTL8Q6UXH0 198 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 CCDC107Q8WV48 283 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 APOPT1Q96IL0 206 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 TEKT5Q96M29 485 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 PCDHGA11Q9Y5H2 935 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 FEZF1A0PJY2 475 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 OR5K3A6NET4 321 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 NPIPB15A6NHN6 443 aaPredicted RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 FKTNO75072 461 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 KCNE1P15382 129 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 SELPP16109 830 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 LCN1P31025 176 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ACTR1AP61163 376 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 PPP2R2BQ00005 443 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 BCL2L1Q07817 233 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ZNF423Q2M1K9 1284 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ZNF750Q32MQ0 723 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 FAM69BQ5VUD6 431 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 KANSL1Q7Z3B3 1105 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 MON1AQ86VX9 555 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 HEATR4Q86WZ0 1026 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 RAB43Q86YS6 212 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 OR2T4Q8NH00 348 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 OR5AK3PQ8NH89 298 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 KLHL6Q8WZ60 621 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 PHYHIPQ92561 330 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 NELL1Q92832 810 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 CREB3L1Q96BA8 519 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 MTERF1Q99551 399 aaKnown RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 TXN2Q99757 166 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ACBD6Q9BR61 282 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 EFCAB11Q9BUY7 163 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 GATA5Q9BWX5 397 aaPredicted RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 WDR26Q9H7D7 661 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 TMEM9Q9P0T7 183 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 DNMT3BQ9UBC3 853 aaKnown RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 BCLAF3A2AJT9 711 aaKnown RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 G3V2L1 256 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 NR5A2O00482 541 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 EPB42P16452 691 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 NOS3P29474 1203 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 WDR5P61964 334 aaKnown RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 RBBP4Q09028 425 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 HYAL2Q12891 473 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ZNF177Q13360 481 aaPredicted RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 GARNL3Q5VVW2 1013 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 TLDC1Q6P9B6 456 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 IFNLR1Q8IU57 520 aaPredicted RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 TMEM151BQ8IW70 566 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 GPR156Q8NFN8 814 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 HPSE2Q8WWQ2 592 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ARMC5Q96C12 935 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 PPM1MQ96MI6 270 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 KLHL32Q96NJ5 620 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 DHRS4Q9BTZ2 278 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 TUBB1Q9H4B7 451 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 PRKAG3Q9UGI9 489 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ERVK-11Q9UQG0 969 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 FADS3Q9Y5Q0 445 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 A0A1B0GVM2 712 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 TCAF2A6NFQ2 919 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 PEX2P28328 305 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 TIE1P35590 1138 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 MAGEA3P43357 314 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 LIMK1P53667 647 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 FADDQ13158 208 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 GRAMD1BQ3KR37 738 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 ZFP69Q49AA0 526 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 SETMARQ53H47 684 aaPredicted RBP3.24□□□□□ -1.89
CHD9-213ENST00000564845 RUNDC3AQ59EK9 446 aa3.24□□□□□ -1.89
CHD9-213ENST00000564845 BROXQ5VW32 411 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms