RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 SARGQ9BW04 601 aa13.22□□□□□ -0.29
CDR2-204ENST00000564542 ATG10Q9H0Y0 220 aa13.22□□□□□ -0.29
CDR2-204ENST00000564542 PARVBQ9HBI1 364 aa13.22□□□□□ -0.29
CDR2-204ENST00000564542 IGSF5Q9NSI5 407 aa13.22□□□□□ -0.29
CDR2-204ENST00000564542 C20orf96Q9NUD7 363 aaPredicted RBP13.22□□□□□ -0.29
CDR2-204ENST00000564542 TRMT6Q9UJA5 497 aaKnown RBP13.22□□□□□ -0.29
CDR2-204ENST00000564542 PPT2Q9UMR5 302 aa13.22□□□□□ -0.29
CDR2-204ENST00000564542 FANCGO15287 622 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 SLC16A5O15375 505 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 KRT38O76015 456 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 HAUS5O94927 633 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 ALOX12P18054 663 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 TRHRP34981 398 aaPredicted RBP13.21□□□□□ -0.29
CDR2-204ENST00000564542 RGS4P49798 205 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 CCR8P51685 355 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 MLF1P58340 268 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 DHX9Q08211 1270 aaKnown RBP13.21□□□□□ -0.29
CDR2-204ENST00000564542 NAE1Q13564 534 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 PWP1Q13610 501 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 DEFB134Q4QY38 66 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 UGT3A1Q6NUS8 523 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 C3P1Q6ZMU1 363 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 MEX3BQ6ZN04 569 aaKnown RBP13.21□□□□□ -0.29
CDR2-204ENST00000564542 QSOX2Q6ZRP7 698 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 STRA8Q7Z7C7 330 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 ZNF227Q86WZ6 799 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 PALM2Q8IXS6 379 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 POGLUT1Q8NBL1 392 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 ABHD11Q8NFV4 315 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 EEF1AKMT1Q8WVE0 214 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 TMEM125Q96AQ2 219 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 ALKBH8Q96BT7 664 aaKnown RBP13.21□□□□□ -0.29
CDR2-204ENST00000564542 SDCCAG3Q96C92 435 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 FAM167BQ9BTA0 163 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 COQ3Q9NZJ6 369 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 FBXO5Q9UKT4 447 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 ZFHX3Q15911 3703 aa13.21□□□□□ -0.29
CDR2-204ENST00000564542 GTF3C1Q12789 2109 aa13.21□□□□□ -0.3
CDR2-204ENST00000564542 TRBC2A0A5B9 178 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 SAGE2PA6NJ88 616 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 GOLGA8MH3BSY2 632 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 TFECO14948 347 aaPredicted RBP13.2□□□□□ -0.3
CDR2-204ENST00000564542 CHST10O43529 356 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 OR1F1O43749 312 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 CEP104O60308 925 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 KRT14P02533 472 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 NPPBP16860 134 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 CDC25BP30305 580 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 PTGER1P34995 402 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 MAGEA3P43357 314 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 HLCSP50747 726 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 ITGA8P53708 1063 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 OLR1P78380 273 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 MEF2AQ02078 507 aaPredicted RBP13.2□□□□□ -0.3
CDR2-204ENST00000564542 PHKG1Q16816 387 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 MYO1HQ8N1T3 1032 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 ARMC10Q8N2F6 343 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 AGGF1Q8N302 714 aaeCLIP13.2□□□□□ -0.3
CDR2-204ENST00000564542 SPC24Q8NBT2 197 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 OR4K1Q8NGD4 311 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 FAM57AQ8TBR7 257 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 NDNQ99608 321 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 TAS2R13Q9NYV9 303 aa13.2□□□□□ -0.3
CDR2-204ENST00000564542 KLF13Q9Y2Y9 288 aaPredicted RBP13.2□□□□□ -0.3
CDR2-204ENST00000564542 MED13LQ71F56 2210 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 TCRBV16S1A1N1A0A5B0 115 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 FCHO1O14526 889 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 PRMT3O60678 531 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 B4GALT2O60909 372 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 DNAJB6O75190 326 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 HIST1H2AGP0C0S8 130 aaPredicted RBP13.19□□□□□ -0.3
CDR2-204ENST00000564542 ZNF888P0CJ79 500 aaPredicted RBP13.19□□□□□ -0.3
CDR2-204ENST00000564542 IGFBP2P18065 325 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 HIST1H2ADP20671 130 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 PTGS2P35354 604 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 MEOX1P50221 254 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 TIAL1Q01085 375 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDR2-204ENST00000564542 RGS1Q08116 209 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 HSP90AA5PQ58FG0 334 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 DUPD1Q68J44 220 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 TTC27Q6P3X3 843 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 ABHD13Q7L211 337 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 CD163Q86VB7 1156 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 CYP4X1Q8N118 509 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 TBC1D19Q8N5T2 526 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDR2-204ENST00000564542 C2CD4AQ8NCU7 369 aaPredicted RBP13.19□□□□□ -0.3
CDR2-204ENST00000564542 OR56A3Q8NH54 315 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 NT5CQ8TCD5 201 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 SNF8Q96H20 258 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 HIST1H2AHQ96KK5 128 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 PTCHD1Q96NR3 888 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 HIST1H2AJQ99878 128 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 H2AFJQ9BTM1 129 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 MAD1L1Q9Y6D9 718 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 MTORP42345 2549 aa13.19□□□□□ -0.3
CDR2-204ENST00000564542 IGKV3D-11A0A0A0MRZ8 115 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 A0A1B0GTH9 108 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 PABPN1LA6NDY0 278 aaKnown RBP13.18□□□□□ -0.3
CDR2-204ENST00000564542 KLRC4-KLRK1H3BQV0 150 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 199.8 ms