RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 RPUSD3Q6P087 351 aaKnown RBP3.72□□□□□ -1.81
UBR1-205ENST00000564540 RTL3Q8N8U3 475 aaKnown RBP3.72□□□□□ -1.81
UBR1-205ENST00000564540 IL12RB2Q99665 862 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 RAB9BQ9NP90 201 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 IARS2Q9NSE4 1012 aaKnown RBP3.72□□□□□ -1.81
UBR1-205ENST00000564540 SLC12A6Q9UHW9 1150 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 TSPAN16Q9UKR8 245 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 NSG2Q9Y328 171 aa3.72□□□□□ -1.81
UBR1-205ENST00000564540 RNF103O00237 685 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 OGTO15294 1046 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 SIGLEC5O15389 551 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 MTRF1O75570 445 aaKnown RBP3.71□□□□□ -1.82
UBR1-205ENST00000564540 PRDM1O75626 825 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 DNTTP04053 509 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 LDHCP07864 332 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 ADORA3P0DMS8 318 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 GIFP27352 417 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 SSTR1P30872 391 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 GMPSP49915 693 aaPredicted RBP3.71□□□□□ -1.82
UBR1-205ENST00000564540 MFAP3P55082 362 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 ABCE1P61221 599 aaKnown RBP3.71□□□□□ -1.82
UBR1-205ENST00000564540 SIX1Q15475 284 aaPredicted RBP3.71□□□□□ -1.82
UBR1-205ENST00000564540 RNF212Q495C1 297 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 FAM182AQ5T1J6 154 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 BTNL8Q6UX41 500 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 PCGF5Q86SE9 256 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 PRUNE1Q86TP1 453 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 CATSPER3Q86XQ3 398 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 CROCCP3Q8IVE0 287 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 DND1Q8IYX4 353 aaKnown RBP3.71□□□□□ -1.82
UBR1-205ENST00000564540 PRSS35Q8N3Z0 413 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 OR5M9Q8NGP3 310 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 C11orf52Q96A22 123 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 PSMB7Q99436 277 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 C3orf14Q9HBI5 128 aa3.71□□□□□ -1.82
UBR1-205ENST00000564540 ZNF107Q9UII5 783 aaPredicted RBP3.71□□□□□ -1.82
UBR1-205ENST00000564540 PRRC2AP48634 2157 aaKnown RBP3.7□□□□□ -1.82
UBR1-205ENST00000564540 RNF123Q5XPI4 1314 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 A0A087WWV3 80 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 IQCMA0A1B0GVH7 501 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 NKX6-3A6NJ46 265 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 PRSS46E5RG02 174 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 PDHXO00330 501 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 MT-ND2P03891 347 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 IL10RBQ08334 325 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 ZNF273Q14593 569 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 MLF2Q15773 248 aaPredicted RBP3.7□□□□□ -1.82
UBR1-205ENST00000564540 FAM174BQ3ZCQ3 159 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 ZNF542PQ5EBM4 170 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 TCP11X2Q5H9J9 407 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 KRT74Q7RTS7 529 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 KCNMB4Q86W47 210 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 ZC3H3Q8IXZ2 948 aaKnown RBP3.7□□□□□ -1.82
UBR1-205ENST00000564540 CCAR2Q8N163 923 aaKnown RBP3.7□□□□□ -1.82
UBR1-205ENST00000564540 TEX26Q8N6G2 289 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 LURAP1Q96LR2 239 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 ALKBH7Q9BT30 221 aaPredicted RBP3.7□□□□□ -1.82
UBR1-205ENST00000564540 PAPOLGQ9BWT3 736 aaKnown RBP3.7□□□□□ -1.82
UBR1-205ENST00000564540 RABEP2Q9H5N1 569 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 EXOC1Q9NV70 894 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 NKIRAS2Q9NYR9 191 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 AGTPBP1Q9UPW5 1226 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 CCL27Q9Y4X3 112 aa3.7□□□□□ -1.82
UBR1-205ENST00000564540 TRAV18A0A075B6X5 111 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 TMEM150CB9EJG8 249 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 TNFSF12O43508 249 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 ZNF354AO60765 605 aaPredicted RBP3.69□□□□□ -1.82
UBR1-205ENST00000564540 CCDC175P0C221 793 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 EEF2P13639 858 aaKnown RBP3.69□□□□□ -1.82
UBR1-205ENST00000564540 PSMA3P25788 255 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 EEF1DP29692 281 aaKnown RBP3.69□□□□□ -1.82
UBR1-205ENST00000564540 KRT20P35900 424 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 CRKLP46109 303 aaKnown RBP3.69□□□□□ -1.82
UBR1-205ENST00000564540 CDX1P47902 265 aaPredicted RBP3.69□□□□□ -1.82
UBR1-205ENST00000564540 SRPXP78539 464 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 ITPK1Q13572 414 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 C6orf136Q5SQH8 315 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 CHST3Q7LGC8 479 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 TRMT11Q7Z4G4 463 aaKnown RBP3.69□□□□□ -1.82
UBR1-205ENST00000564540 CARM1Q86X55 608 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 LSMEM1Q8N8F7 131 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 C4orf32Q8N8J7 132 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 OR4Q3Q8NH05 313 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 SLC26A7Q8TE54 656 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 FER1L6-AS2Q96M78 137 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 TAAR6Q96RI8 345 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 SATB2Q9UPW6 733 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 RUVBL2Q9Y230 463 aaKnown RBP3.69□□□□□ -1.82
UBR1-205ENST00000564540 KLK4Q9Y5K2 254 aa3.69□□□□□ -1.82
UBR1-205ENST00000564540 ZNF646O15015 1829 aaPredicted RBP3.69□□□□□ -1.82
UBR1-205ENST00000564540 RALGAPA1Q6GYQ0 2036 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 RPL37AP8A6NKH3 93 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 A8MU76 341 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 K7EQG2 157 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 MLNRO43193 412 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 SPP1P10451 314 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 LBPP18428 481 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 LMO2P25791 158 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 FEN1P39748 380 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms